RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 BCL2L2Q92843 193 aaPredicted RBP13.15□□□□□ -0.3
VARS-223ENST00000474643 C7orf34Q96L11 122 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 GPR35Q9HC97 309 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 DYNLRB1Q9NP97 96 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 INIPQ9NRY2 104 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 POFUT2Q9Y2G5 429 aa13.15□□□□□ -0.3
VARS-223ENST00000474643 PLCE1Q9P212 2302 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 A0A087WUU8 490 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 A0A1W2PRQ8 180 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 GPRIN2O60269 458 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 SEC14L2O76054 403 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 LY6HO94772 140 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 ZNF432O94892 652 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 PRSS23O95084 383 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 GADD45GO95257 159 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 SEMG1P04279 462 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 CD79AP11912 226 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 ARR3P36575 388 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 MAGEA2P43356 314 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 GPR4P46093 362 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 CSNK1A1P48729 337 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 DAP3P51398 398 aaKnown RBP13.14□□□□□ -0.31
VARS-223ENST00000474643 LSM11P83369 360 aaKnown RBP eCLIP13.14□□□□□ -0.31
VARS-223ENST00000474643 PRKCDQ05655 676 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 DGCR6Q14129 220 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 FAM98BQ52LJ0 330 aaKnown RBP13.14□□□□□ -0.31
VARS-223ENST00000474643 CYB5R2Q6BCY4 276 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 CCDC36Q8IYA8 594 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 PAPD5Q8NDF8 572 aaKnown RBP13.14□□□□□ -0.31
VARS-223ENST00000474643 OR51A7Q8NH64 312 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 BEX2Q9BXY8 128 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 ULBP2Q9BZM5 246 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 YY1AP1Q9H869 796 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 IL1RAPQ9NPH3 570 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 TMCC3Q9ULS5 477 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 AURKCQ9UQB9 309 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 TMEM5Q9Y2B1 443 aa13.14□□□□□ -0.31
VARS-223ENST00000474643 TRAV27A0A087WT01 109 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 NDUFS8O00217 210 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 MAKP20794 623 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 FUT4P22083 530 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 RRM2P31350 389 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 CLRN1P58418 232 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 TOP3AQ13472 1001 aaPredicted RBP13.13□□□□□ -0.31
VARS-223ENST00000474643 GK3PQ14409 553 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 LAPTM4AQ15012 233 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 TAF11Q15544 211 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 C3orf36Q3SXR2 165 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 ALG10Q5BKT4 473 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 HDDC2Q7Z4H3 204 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 TSEN54Q7Z6J9 526 aaKnown RBP13.13□□□□□ -0.31
VARS-223ENST00000474643 HIPK1Q86Z02 1210 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 C20orf196Q8IYI0 205 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 TMEM123Q8N131 208 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 ZNF540Q8NDQ6 660 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 OR6X1Q8NH79 312 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 MOSPD2Q8NHP6 518 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 ZNF566Q969W8 418 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 BOD1Q96IK1 185 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 FAM46AQ96IP4 442 aaKnown RBP13.13□□□□□ -0.31
VARS-223ENST00000474643 LRR1Q96L50 414 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 SORCS2Q96PQ0 1159 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 MDFIQ99750 246 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 SHARPINQ9H0F6 387 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 MYOZ1Q9NP98 299 aaPredicted RBP13.13□□□□□ -0.31
VARS-223ENST00000474643 SPEF1Q9Y4P9 236 aa13.13□□□□□ -0.31
VARS-223ENST00000474643 SONP18583 2426 aaKnown RBP13.13□□□□□ -0.31
VARS-223ENST00000474643 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
VARS-223ENST00000474643 CR1P17927 2039 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 DHRS12A0PJE2 317 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 RNF212BA8MTL3 300 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
VARS-223ENST00000474643 RPL36A-HNRNPH2H7BZ11 118 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 RAB36O95755 333 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 IGHG1P01857 330 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 RAP2AP10114 183 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 APEHP13798 732 aaKnown RBP13.12□□□□□ -0.31
VARS-223ENST00000474643 CBR1P16152 277 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
VARS-223ENST00000474643 NPR2P20594 1047 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 HNF1AP20823 631 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
VARS-223ENST00000474643 SLC9A3P48764 834 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 GZMKP49863 264 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 GALK2Q01415 458 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 DAG1Q14118 895 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ADIPOQQ15848 244 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 SWI5Q1ZZU3 235 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ZFP1Q6P2D0 407 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 ZNF813Q6ZN06 617 aa13.12□□□□□ -0.31
VARS-223ENST00000474643 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms