RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ZNF346Q9UL40 294 aaKnown RBP15.49■□□□□ 0.07
UPF3A-203ENST00000474056 MALRD1Q5VYJ5 2156 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 HTR3EA5X5Y0 456 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 EFCAB9A8MZ26 197 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 CDC42EP2O14613 210 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 IGHMP01871 453 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 GPR4P46093 362 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 PPOXP50336 477 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 RPL27P61353 136 aaKnown RBP15.48■□□□□ 0.07
UPF3A-203ENST00000474056 CD47Q08722 323 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 TAF11Q15544 211 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 KRTAP21-3Q3LHN1 58 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 MBOAT2Q6ZWT7 520 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 SLC16A14Q7RTX9 510 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 CYP4Z1Q86W10 505 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 RNF113BQ8IZP6 322 aaKnown RBP15.48■□□□□ 0.07
UPF3A-203ENST00000474056 PGAM4Q8N0Y7 254 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 SVOPLQ8N434 492 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 CLDN22Q8N7P3 220 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 C10orf105Q8TEF2 133 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 NMD3Q96D46 503 aaKnown RBP15.48■□□□□ 0.07
UPF3A-203ENST00000474056 TNFRSF13CQ96RJ3 184 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 NMNAT1Q9HAN9 279 aaPredicted RBP15.48■□□□□ 0.07
UPF3A-203ENST00000474056 TAGLN3Q9UI15 199 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 FBXL3Q9UKT7 428 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 FKBP7Q9Y680 259 aa15.48■□□□□ 0.07
UPF3A-203ENST00000474056 ENTPD5O75356 428 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 DIRAS1O95057 198 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 SLC25A16P16260 332 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 CDAP32320 146 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 SLC9A3P48764 834 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 VLDLRP98155 873 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 NRN1LQ496H8 165 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 TMEM53Q6P2H8 277 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 OAFQ86UD1 273 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 CDK20Q8IZL9 346 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 LRRC18Q8N456 261 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 SLC7A13Q8TCU3 470 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 NSMAFQ92636 917 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 C7orf34Q96L11 122 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 LRRC37BQ96QE4 947 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 TSPAN32Q96QS1 320 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 DOK1Q99704 481 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 MRPL37Q9BZE1 423 aaKnown RBP15.47■□□□□ 0.07
UPF3A-203ENST00000474056 ANKRD19PQ9H560 264 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 RNF121Q9H920 327 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 NDUFAF4Q9P032 175 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 SAMD4AQ9UPU9 718 aaKnown RBP15.47■□□□□ 0.07
UPF3A-203ENST00000474056 CMAHPQ9Y471 501 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 UGT2A1Q9Y4X1 527 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 V9GYQ6 96 aa15.47■□□□□ 0.07
UPF3A-203ENST00000474056 SH3PXD2BA1X283 911 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 VSTM5A8MXK1 200 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 DCTN3O75935 186 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 SERPINA5P05154 406 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 IGFBP1P08833 259 aaPredicted RBP15.46■□□□□ 0.07
UPF3A-203ENST00000474056 CSF3P09919 207 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 HSD17B1P14061 328 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 MSX2P35548 267 aaPredicted RBP15.46■□□□□ 0.07
UPF3A-203ENST00000474056 PPP2R2BQ00005 443 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 GALK2Q01415 458 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 FXNQ16595 210 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 ANKDD1AQ495B1 522 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 SLC36A2Q495M3 483 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 PODNL1Q6PEZ8 512 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 SLC25A47Q6Q0C1 308 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 ZCCHC24Q8N2G6 241 aaKnown RBP15.46■□□□□ 0.07
UPF3A-203ENST00000474056 PAQR4Q8N4S7 273 aaPredicted RBP15.46■□□□□ 0.07
UPF3A-203ENST00000474056 ZNF519Q8TB69 540 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 MRPL24Q96A35 216 aaKnown RBP15.46■□□□□ 0.07
UPF3A-203ENST00000474056 NABP1Q96AH0 204 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 ALG12Q9BV10 488 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 GORASP2Q9H8Y8 452 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 CD300AQ9UGN4 299 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 SPEF1Q9Y4P9 236 aa15.46■□□□□ 0.07
UPF3A-203ENST00000474056 A0A1W2PRQ8 180 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 GMNNO75496 209 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 SEMG1P04279 462 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 H1F0P07305 194 aaKnown RBP15.45■□□□□ 0.06
UPF3A-203ENST00000474056 MMP7P09237 267 aaPredicted RBP15.45■□□□□ 0.06
UPF3A-203ENST00000474056 CCL2P13500 99 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 ZNF26P17031 533 aaPredicted RBP15.45■□□□□ 0.06
UPF3A-203ENST00000474056 RHCEP18577 417 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 GLRXP35754 106 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 PDLIM4P50479 330 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 MRPS34P82930 218 aaKnown RBP15.45■□□□□ 0.06
UPF3A-203ENST00000474056 DGCR6Q14129 220 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 IQCCQ4KMZ1 466 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 FGD3Q5JSP0 725 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 GKAP1Q5VSY0 366 aaPredicted RBP15.45■□□□□ 0.06
UPF3A-203ENST00000474056 TMPRSS11FQ6ZWK6 438 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 RRM2BQ7LG56 351 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 DPPA2Q7Z7J5 298 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 SLC30A7Q8NEW0 376 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 FAM46AQ96IP4 442 aaKnown RBP15.45■□□□□ 0.06
UPF3A-203ENST00000474056 CDRT15Q96T59 188 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 SMURF2Q9HAU4 748 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 SLC7A8Q9UHI5 535 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 MAGEL2Q9UJ55 1249 aa15.45■□□□□ 0.06
UPF3A-203ENST00000474056 FAM32AQ9Y421 112 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms