RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 RNFT1Q5M7Z0 435 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 CREB3L2Q70SY1 520 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 VASH1Q7L8A9 365 aaPredicted RBP18.33■□□□□ 0.53
TMEM53-207ENST00000468117 CDC20BQ86Y33 519 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 OR6X1Q8NH79 312 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 SNIP1Q8TAD8 396 aaKnown RBP18.33■□□□□ 0.53
TMEM53-207ENST00000468117 TRMT61AQ96FX7 289 aaKnown RBP18.33■□□□□ 0.53
TMEM53-207ENST00000468117 TM9SF2Q99805 663 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 MARCH7Q9H992 704 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 TRIM36Q9NQ86 728 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 ING1Q9UK53 422 aaPredicted RBP18.33■□□□□ 0.53
TMEM53-207ENST00000468117 STUB1Q9UNE7 303 aa18.33■□□□□ 0.53
TMEM53-207ENST00000468117 SF3B6Q9Y3B4 125 aaKnown RBP18.33■□□□□ 0.53
TMEM53-207ENST00000468117 PRR32B1ATL7 298 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 IGHG1P01857 330 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 PMP22Q01453 160 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 LSAMPQ13449 338 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 SLC17A1Q14916 467 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 MEP1BQ16820 701 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 RPTNQ6XPR3 784 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 FAM109AQ8N4B1 249 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 NOXO1Q8NFA2 376 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 OR9K2Q8NGE7 335 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF845Q96IR2 970 aaPredicted RBP18.33■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF385AQ96PM9 386 aaKnown RBP18.33■□□□□ 0.52
TMEM53-207ENST00000468117 GNG8Q9UK08 70 aa18.33■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF726A6NNF4 738 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 NPIPA2E9PIF3 369 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF670-ZNF695F2Z2N8 137 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 NPIPA3F8WFD2 350 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 MPZL1O95297 269 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 BDH1Q02338 343 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 SRYQ05066 204 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 SLC10A1Q14973 349 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 POU4F3Q15319 338 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 DNM1P34Q6PK57 102 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ROBO4Q8WZ75 1007 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 NSMAFQ92636 917 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ADAD1Q96M93 576 aaKnown RBP18.32■□□□□ 0.52
TMEM53-207ENST00000468117 RBP7Q96R05 134 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 DEFB127Q9H1M4 99 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 LAMP5Q9UJQ1 280 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 MSRB2Q9Y3D2 182 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 GRIP1Q9Y3R0 1128 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 LIPGQ9Y5X9 500 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 PIEZO1Q92508 2521 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ACOT7O00154 380 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF593O00488 134 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-207ENST00000468117 AHCYL1O43865 530 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 BLVRAP53004 296 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 CLDN18P56856 261 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ASB18Q6ZVZ8 466 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 HDDC2Q7Z4H3 204 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 SYS1Q8N2H4 156 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 SMAD5Q99717 465 aaKnown RBP18.32■□□□□ 0.52
TMEM53-207ENST00000468117 TMED9Q9BVK6 235 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 DCSTAMPQ9H295 470 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 ACOXLQ9NUZ1 547 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 QPCTLQ9NXS2 382 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 KCNG2Q9UJ96 466 aa18.32■□□□□ 0.52
TMEM53-207ENST00000468117 GABRA5P31644 462 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 PEX19P40855 299 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 ADAM8P78325 824 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 HSF2Q03933 536 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 THEM4Q5T1C6 240 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 PLEKHG7Q6ZR37 379 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF775Q96BV0 537 aaPredicted RBP18.31■□□□□ 0.52
TMEM53-207ENST00000468117 PELI1Q96FA3 418 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 ACKR4Q9NPB9 350 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 ATMQ13315 3056 aa18.31■□□□□ 0.52
TMEM53-207ENST00000468117 KHDRBS3O75525 346 aaKnown RBP18.3■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF708P17019 499 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 ALOX5APP20292 161 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 PTGS2P35354 604 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 SLC26A10Q8NG04 563 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 OTOSQ8NHW6 89 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 DYNC2LI1Q8TCX1 351 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 THEM6Q8WUY1 208 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 SSR3Q9UNL2 185 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 TRAV17A0A0B4J275 112 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 SPARCP09486 303 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 PDSS1Q5T2R2 415 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF684Q5T5D7 378 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 ZIC4Q8N9L1 334 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 ABTB1Q969K4 478 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-207ENST00000468117 CPNE4Q96A23 557 aaPredicted RBP18.3■□□□□ 0.52
TMEM53-207ENST00000468117 AMELYQ99218 206 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 TIGARQ9NQ88 270 aa18.3■□□□□ 0.52
TMEM53-207ENST00000468117 CENPBD1B2RD01 187 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 FABP5Q01469 135 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 HIST3H3Q16695 136 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 ARL9Q6T311 187 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 GDPGP1Q6ZNW5 385 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 USP43Q70EL4 1123 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 MRPL48Q96GC5 212 aaKnown RBP18.29■□□□□ 0.52
TMEM53-207ENST00000468117 SF3B5Q9BWJ5 86 aaKnown RBP18.29■□□□□ 0.52
TMEM53-207ENST00000468117 LDAHQ9H6V9 325 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 TXNL4BQ9NX01 149 aaKnown RBP18.29■□□□□ 0.52
TMEM53-207ENST00000468117 TMEM14AQ9Y6G1 99 aa18.29■□□□□ 0.52
TMEM53-207ENST00000468117 ZNF716A6NP11 495 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms