RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MEOX1P50221 254 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 LRRC28Q86X40 367 aaPredicted RBP16.68■□□□□ 0.26
CAPN3-209ENST00000466222 GTPBP8Q8N3Z3 284 aaPredicted RBP16.68■□□□□ 0.26
CAPN3-209ENST00000466222 OR14L1PQ8NHC6 308 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 ZBTB8AQ96BR9 441 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 RNF170Q96K19 258 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 SHISA3A0PJX4 238 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 FAM25AB3EWG3 89 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 FAM25CB3EWG5 89 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 FAM25GB3EWG6 89 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 RRP8O43159 456 aaKnown RBP16.68■□□□□ 0.26
CAPN3-209ENST00000466222 FAM157BP0CG42 384 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 CD46P15529 392 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 MAGEA5P43359 124 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 B3GALT5-AS1P59052 145 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 ACTC1P68032 377 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 ACTA1P68133 377 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 PMP22Q01453 160 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 POU4F2Q12837 409 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 TMEM176BQ3YBM2 270 aaPredicted RBP16.68■□□□□ 0.26
CAPN3-209ENST00000466222 FAM69AQ5T7M9 428 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 HACD4Q5VWC8 232 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 TRILQ7L0X0 811 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 KDM8Q8N371 416 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 LILRB4Q8NHJ6 448 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 HAO2Q9NYQ3 351 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 BOKQ9UMX3 212 aaPredicted RBP16.68■□□□□ 0.26
CAPN3-209ENST00000466222 ADAM18Q9Y3Q7 739 aa16.68■□□□□ 0.26
CAPN3-209ENST00000466222 ACACAQ13085 2346 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 A0A087WZY1 265 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 FAM240BA0A1B0GVZ2 78 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 FAM183AA6NL82 134 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 RIIAD1A6NNX1 92 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 K7ENP7 123 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 PLPP2O43688 288 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 ORC5O43913 435 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 PPP1R3DO95685 299 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 F13BP05160 661 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 KLK2P20151 261 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 SRD5A2P31213 254 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 TALDO1P37837 337 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 RAB25P57735 213 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 RPS4XP62701 263 aaKnown RBP16.67■□□□□ 0.26
CAPN3-209ENST00000466222 FOXK2Q01167 660 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 MYBPHQ13203 477 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 P2RY14Q15391 338 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 OR7A5Q15622 319 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 RNFT1Q5M7Z0 435 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 INO80CQ6PI98 192 aaPredicted RBP16.67■□□□□ 0.26
CAPN3-209ENST00000466222 STK35Q8TDR2 534 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 KISS1RQ969F8 398 aaPredicted RBP16.67■□□□□ 0.26
CAPN3-209ENST00000466222 SCMH1Q96GD3 660 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 DMRTB1Q96MA1 342 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 C5orf34Q96MH7 638 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 OR5B2Q96R09 309 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 SMAD5Q99717 465 aaKnown RBP16.67■□□□□ 0.26
CAPN3-209ENST00000466222 TTYH2Q9BSA4 534 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 MARVELD1Q9BSK0 173 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 IFT27Q9BW83 186 aa16.67■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF703Q9H7S9 590 aaPredicted RBP16.67■□□□□ 0.26
CAPN3-209ENST00000466222 ISG20L2Q9H9L3 353 aaKnown RBP16.67■□□□□ 0.26
CAPN3-209ENST00000466222 A0A0B4J293 547 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 FTCDNL1E5RQL4 147 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 AHSA1O95433 338 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 ADH6P28332 368 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 ERP29P30040 261 aaKnown RBP16.66■□□□□ 0.26
CAPN3-209ENST00000466222 GRPRP30550 384 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 EIF1P41567 113 aaKnown RBP16.66■□□□□ 0.26
CAPN3-209ENST00000466222 STARP49675 285 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 C3orf33Q6P1S2 294 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 TMEM251Q8N6I4 163 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 TMEM99Q8N816 258 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 SLC37A3Q8NCC5 494 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 UBASH3BQ8TF42 649 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 LIPHQ8WWY8 451 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 DDIT4LQ96D03 193 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 B3GAT2Q9NPZ5 323 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 SERINC1Q9NRX5 453 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 CYSLTR2Q9NS75 346 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 TAS2R5Q9NYW4 299 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 KLF13Q9Y2Y9 288 aaPredicted RBP16.66■□□□□ 0.26
CAPN3-209ENST00000466222 CACNA1AO00555 2505 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF208O43345 1280 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 NCR1O76036 304 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 WISP2O76076 250 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 IGF2P01344 180 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 PSKH1P11801 424 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 PLGLB1Q02325 96 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 TATDN3Q17R31 274 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 TEX19Q8NA77 164 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 GRPEL2Q8TAA5 225 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF417Q8TAU3 575 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 EXTL1Q92935 676 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF587Q96SQ5 575 aaPredicted RBP16.66■□□□□ 0.26
CAPN3-209ENST00000466222 TIMP4Q99727 224 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 NIPAL2Q9H841 368 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 RANGRFQ9HD47 186 aaPredicted RBP16.66■□□□□ 0.26
CAPN3-209ENST00000466222 EXTL2Q9UBQ6 330 aa16.66■□□□□ 0.26
CAPN3-209ENST00000466222 SLC6A5Q9Y345 797 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms