RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ARL8BQ9NVJ2 186 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ADPRHL2Q9NX46 363 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 PAQR5Q9NXK6 330 aaPredicted RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 ELOVL5Q9NYP7 299 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 KLHL9Q9P2J3 617 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 B3GAT1Q9P2W7 334 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TRAPPC4Q9Y296 219 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 HDGFL3Q9Y3E1 203 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CAPN7Q9Y6W3 813 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CHD3Q12873 2000 aaKnown RBP4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 TLN2Q9Y4G6 2542 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 CUBNO60494 3623 aa4.2□□□□□ -1.74
EXOSC3-204ENST00000465860 NSD1Q96L73 2696 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ARFGEF3Q5TH69 2177 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 A0A087WUJ7 227 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 A8MVM7 634 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 J3KTA2 159 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 FFAR1O14842 300 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 AIM2O14862 343 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 RAD51DO75771 328 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 PNMTP11086 282 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 NCK1P16333 377 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 CD53P19397 219 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 FUT1P19526 365 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 COX5AP20674 150 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 GRPRP30550 384 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MAP2K6P52564 334 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC7A2P52569 658 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 RGS8P57771 180 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 COPZ1P61923 177 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC35A1P78382 337 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 LIPEQ05469 1076 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 RBBP4Q09028 425 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 FOXD4Q12950 439 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ITGADQ13349 1161 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 GNA13Q14344 377 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 PDK3Q15120 406 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ETFDHQ16134 617 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MMEL1Q495T6 779 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 COQ5Q5HYK3 327 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ALG10BQ5I7T1 473 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 OTUD3Q5T2D3 398 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 PAQR6Q6TCH4 344 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 C6orf89Q6UWU4 347 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 PAMR1Q6UXH9 720 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 CREB3L2Q70SY1 520 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 BHLHA15Q7RTS1 189 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 YTHDF3Q7Z739 585 aaKnown RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 PIGWQ7Z7B1 504 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 VTCN1Q7Z7D3 282 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 GALNT5Q7Z7M9 940 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 GPAT4Q86UL3 456 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MYPOPQ86VE0 399 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MEX3DQ86XN8 651 aaKnown RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 NKAIN4Q8IVV8 208 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 LRRC17Q8N6Y2 441 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 RNF148Q8N7C7 305 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 FAM86B1Q8N7N1 296 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 FAM156AQ8NDB6 213 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 OR9K2Q8NGE7 335 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 OR8J3Q8NGG0 315 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 PFN4Q8NHR9 129 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 RP9Q8TA86 221 aaKnown RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ADAMTS16Q8TE57 1224 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 IGFBPL1Q8WX77 278 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 RPL36ALQ969Q0 106 aaKnown RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC35B4Q969S0 331 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 LRRC46Q96FV0 321 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 TXNDC15Q96J42 360 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF607Q96SK3 696 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MCHR1Q99705 422 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ECSITQ9BQ95 431 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 C1QTNF6Q9BXI9 259 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 QTRT1Q9BXR0 403 aaKnown RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 TCF7L1Q9HCS4 588 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 MEPEQ9NQ76 525 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 NDRG3Q9UGV2 375 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC7A7Q9UM01 511 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 CORO2BQ9UQ03 480 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 ANGPT4Q9Y264 503 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 NOSIPQ9Y314 301 aaKnown RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 SPIN1Q9Y657 262 aaPredicted RBP4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 CR1P17927 2039 aa4.19□□□□□ -1.74
EXOSC3-204ENST00000465860 YLPM1P49750 1951 aaKnown RBP4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 GMNCA6NCL1 334 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 PRORSD1PA6NEY8 169 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 DPRXA6NFQ7 191 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 BBIP1A8MTZ0 92 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 FAM220BPB1ANY3 271 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 SHISA9B4DS77 424 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 KPNA4O00629 521 aaPredicted RBP4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC22A2O15244 555 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 DNPH1O43598 174 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 PIP5K1CO60331 668 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 EIF1BO60739 113 aaKnown RBP4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 UPK3AO75631 287 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 SERPINB7O75635 380 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 SEC14L2O76054 403 aa4.18□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF432O94892 652 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms