RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SWT1Q5T5J6 900 aaKnown RBP12.4□□□□□ -0.42
MCF2L-220ENST00000464800 SLC2A7Q6PXP3 512 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 SLC35D2Q76EJ3 337 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 DOK3Q7L591 496 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 RANBP3LQ86VV4 465 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-220ENST00000464800 OR4K5Q8NGD3 323 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 CCL17Q92583 94 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 POP5Q969H6 163 aaKnown RBP12.4□□□□□ -0.42
MCF2L-220ENST00000464800 LRRC58Q96CX6 371 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 C1QTNF5Q9BXJ0 243 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 PAIP1Q9H074 479 aaKnown RBP12.4□□□□□ -0.42
MCF2L-220ENST00000464800 UBAP1Q9NZ09 502 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 SLC13A4Q9UKG4 626 aa12.4□□□□□ -0.42
MCF2L-220ENST00000464800 PPIAL4EA0A075B759 164 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 PPIAL4DF5H284 164 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 DHHO43323 396 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 TPST1O60507 370 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 FOXH1O75593 365 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 IGHV3-13P01766 116 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 PPIAL4FP0DN26 164 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 MAKP20794 623 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 ATP4BP51164 291 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 CDH12P55289 794 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 IL13RA1P78552 427 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 SLC3A1Q07837 685 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 GCNT6Q5T4J0 391 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 REEP3Q6NUK4 255 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 LRFN4Q6PJG9 635 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 SLC16A14Q7RTX9 510 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 GOLGA6L1Q8N7Z2 621 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
MCF2L-220ENST00000464800 CPEB3Q8NE35 698 aaKnown RBP12.39□□□□□ -0.43
MCF2L-220ENST00000464800 BHLHE22Q8NFJ8 381 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-220ENST00000464800 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 SLC25A44Q96H78 314 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-220ENST00000464800 GPA33Q99795 319 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 NUP50Q9UKX7 468 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 RAB21Q9UL25 225 aa12.39□□□□□ -0.43
MCF2L-220ENST00000464800 A0A0G2JK05 382 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 PLSCR5A0PG75 271 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 RNF13O43567 381 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 SPRY3O43610 288 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 IGHV1-46P01743 117 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 PGA4P0DJD7 388 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 PGA3P0DJD8 388 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 HOXB9P17482 250 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-220ENST00000464800 GCH1P30793 250 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 APLNRP35414 380 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 SLC18A1P54219 525 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 CDK6Q00534 326 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 HSF2Q03933 536 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 BAMBIQ13145 260 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 MELKQ14680 651 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 TUSC1Q2TAM9 212 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 NRN1LQ496H8 165 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 DEFB108BQ8NET1 73 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 EGLN1Q9GZT9 426 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 NKIRAS1Q9NYS0 192 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF69Q9UC07 566 aa12.38□□□□□ -0.43
MCF2L-220ENST00000464800 PURGQ9UJV8 347 aaKnown RBP12.38□□□□□ -0.43
MCF2L-220ENST00000464800 POM121CA8CG34 1229 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 UBOX5O94941 541 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 RNASE1P07998 156 aaKnown RBP12.37□□□□□ -0.43
MCF2L-220ENST00000464800 QDPRP09417 244 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF84P51523 738 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 CLRN1P58418 232 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 IPCEF1Q8WWN9 437 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-220ENST00000464800 SLC25A28Q96A46 364 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 C1orf147Q96MC9 270 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF607Q96SK3 696 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 EVA1AQ9H8M9 152 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 SLC25A37Q9NYZ2 338 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-220ENST00000464800 TRIM33Q9UPN9 1127 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 AUP1Q9Y679 476 aa12.37□□□□□ -0.43
MCF2L-220ENST00000464800 ZSCAN5BA6NJL1 495 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 CHP2O43745 196 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 TPST2O60704 377 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 SERPINB7O75635 380 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 CH25HO95992 272 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 IGHG1P01857 330 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 CCNOP22674 350 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 ZFP36P26651 326 aaKnown RBP12.36□□□□□ -0.43
MCF2L-220ENST00000464800 MMP15P51511 669 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 MAGOHP61326 146 aaKnown RBP12.36□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF154Q13106 437 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 SCARB2Q14108 478 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF74Q16587 644 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF718Q3SXZ3 478 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 ZNF613Q6PF04 617 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 ARMC8Q8IUR7 673 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 MSRB3Q8IXL7 192 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 C10orf111Q8N326 155 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 LRRC18Q8N456 261 aa12.36□□□□□ -0.43
MCF2L-220ENST00000464800 SYT14Q8NB59 555 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms