RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 RFX4Q33E94 735 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 FAHD1Q6P587 224 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 ZNF813Q6ZN06 617 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 DPY19L2P2Q6ZN68 376 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 ZNF611Q8N823 705 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 PIGTQ969N2 578 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 GTPBP3Q969Y2 492 aaKnown RBP14.86□□□□□ -0.03
VPS52-215ENST00000464425 NIPSNAP1Q9BPW8 284 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 GABARAPL1Q9H0R8 117 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 TXNIPQ9H3M7 391 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 IL20Q9NYY1 176 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 CISD1Q9NZ45 108 aaKnown RBP14.86□□□□□ -0.03
VPS52-215ENST00000464425 DSCAMO60469 2012 aa14.86□□□□□ -0.03
VPS52-215ENST00000464425 ZNF503-AS2A6NEH8 195 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 TRMUO75648 421 aaKnown RBP14.85□□□□□ -0.03
VPS52-215ENST00000464425 CD14P08571 375 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 HOXB1P14653 301 aaPredicted RBP14.85□□□□□ -0.03
VPS52-215ENST00000464425 B4GALT1P15291 398 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 ACADSP16219 412 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 CDH11P55287 796 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 MYBPC1Q00872 1141 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 ARMC4Q5T2S8 1044 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 C1QTNF12Q5T7M4 302 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 ZNF620Q6ZNG0 422 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 HDDC2Q7Z4H3 204 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 ATG16L2Q8NAA4 619 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 FANK1Q8TC84 345 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 FBXW5Q969U6 566 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 RADILQ96JH8 1075 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 FOXB1Q99853 325 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 MRPL13Q9BYD1 178 aaKnown RBP14.85□□□□□ -0.03
VPS52-215ENST00000464425 OR52D1Q9H346 318 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 NRIP3Q9NQ35 241 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 BEX4Q9NWD9 120 aaPredicted RBP14.85□□□□□ -0.03
VPS52-215ENST00000464425 STX18Q9P2W9 335 aaKnown RBP14.85□□□□□ -0.03
VPS52-215ENST00000464425 POU2F3Q9UKI9 436 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 ZNF346Q9UL40 294 aaKnown RBP14.85□□□□□ -0.03
VPS52-215ENST00000464425 OAZ3Q9UMX2 235 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 LAMP3Q9UQV4 416 aa14.85□□□□□ -0.03
VPS52-215ENST00000464425 HEATR1Q9H583 2144 aaKnown RBP14.84□□□□□ -0.03
VPS52-215ENST00000464425 IGHV1-18A0A0C4DH31 117 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 CENPBD1B2RD01 187 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 HLA-HP01893 362 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 APEHP13798 732 aaKnown RBP14.84□□□□□ -0.03
VPS52-215ENST00000464425 SLC6A6P31641 620 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 RPL4P36578 427 aaKnown RBP14.84□□□□□ -0.03
VPS52-215ENST00000464425 ACVR1BP36896 505 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 RPL27P61353 136 aaKnown RBP14.84□□□□□ -0.03
VPS52-215ENST00000464425 PIGFQ07326 219 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 FAM205BPQ63HN1 556 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 THSD4Q6ZMP0 1018 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 MDP1Q86V88 176 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 DEPDC4Q8N2C3 294 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 NOXO1Q8NFA2 376 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 SMAP2Q8WU79 429 aaPredicted RBP14.84□□□□□ -0.03
VPS52-215ENST00000464425 HDAC2Q92769 488 aaKnown RBP14.84□□□□□ -0.03
VPS52-215ENST00000464425 MCHR2Q969V1 340 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 SLC38A2Q96QD8 506 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 DCLRE1BQ9H816 532 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 REV1Q9UBZ9 1251 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 ATP23Q9Y6H3 246 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 CDH10Q9Y6N8 788 aa14.84□□□□□ -0.03
VPS52-215ENST00000464425 E7EQL1 145 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 IMPA2O14732 288 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 ARPC3O15145 178 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 DHHO43323 396 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 IDH3BO43837 385 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 SMPD2O60906 423 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 BAG2O95816 211 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 TP53P04637 393 aaPredicted RBP14.83□□□□□ -0.04
VPS52-215ENST00000464425 SOD3P08294 240 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 CELA3BP08861 270 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 CD79AP11912 226 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 ANPEPP15144 967 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 CBR1P16152 277 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 DAPP51397 102 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 ERVK-25P63136 954 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 NPRL3Q12980 569 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 RCN1Q15293 331 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 HIST3H3Q16695 136 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 KDM4DQ6B0I6 523 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 GPR139Q6DWJ6 353 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 B3GLCTQ6Y288 498 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 FAM122BQ7Z309 247 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 LURAP1LQ8IV03 231 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 CCDC36Q8IYA8 594 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 PARP8Q8N3A8 854 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 ICA1LQ8NDH6 482 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 HTRA1Q92743 480 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 SAMD8Q96LT4 415 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 TSPAN32Q96QS1 320 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 KATNB1Q9BVA0 655 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 CXXC4Q9H2H0 198 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 SEC61A2Q9H9S3 476 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 KIF17Q9P2E2 1029 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 GRHPRQ9UBQ7 328 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 MOKQ9UQ07 419 aa14.83□□□□□ -0.04
VPS52-215ENST00000464425 RAI1Q7Z5J4 1906 aaPredicted RBP14.83□□□□□ -0.04
VPS52-215ENST00000464425 USF3Q68DE3 2245 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 ARID1AO14497 2285 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms