RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 NTN4Q9HB63 628 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 SLC38A10Q9HBR0 1119 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 MRM3Q9HC36 420 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 AGPAT4Q9NRZ5 378 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 TREX1Q9NSU2 369 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 TAS2R16Q9NYV7 291 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF581Q9P0T4 197 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 KCNIP3Q9Y2W7 256 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 YARS2Q9Y2Z4 477 aaKnown RBP3.08□□□□□ -1.92
ITGB1-208ENST00000464001 ADGRA3Q8IWK6 1321 aa3.08□□□□□ -1.92
ITGB1-208ENST00000464001 VSTM2BA6NLU5 285 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 CENPXA8MT69 81 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 E7EWF7 191 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 GFYI3L273 518 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 GOSR2O14653 212 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 EMC8O43402 210 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 OXSR1O95747 527 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 GP1BAP07359 652 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 RPSAP08865 295 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 OCMP0CE72 109 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 PGAM1P18669 254 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 C4BPBP20851 252 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 EDNRAP25101 427 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 IVDP26440 423 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 DRD3P35462 400 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 EMDP50402 254 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ABCE1P61221 599 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 VBP1P61758 197 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 RPL8P62917 257 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 MRPS22P82650 360 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 NDUFA9Q16795 377 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 UPP1Q16831 310 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 EXOC3L4Q17RC7 722 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 TRIM16LQ309B1 348 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 VWA2Q5GFL6 755 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 CLVS2Q5SYC1 327 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 WDR25Q64LD2 544 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 OR8G2PQ6IF36 304 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 FAM151BQ6UXP7 276 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 TMPRSS11AQ6ZMR5 421 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 TMUB2Q71RG4 321 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 SETD3Q86TU7 594 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 SLC22A15Q8IZD6 547 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 BPIFB2Q8N4F0 458 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 NOXO1Q8NFA2 376 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 TTLQ8NG68 377 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 OR4Q3Q8NH05 313 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 RPLP0P6Q8NHW5 317 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 LGALS14Q8TCE9 139 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 TMEM239Q8WW34 195 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 PPP1R14BQ96C90 147 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 DUS3LQ96G46 650 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF75AQ96N20 296 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 OXGR1Q96P68 337 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 OR5B2Q96R09 309 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ZNF251Q9BRH9 671 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 UTP23Q9BRU9 249 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 API5Q9BZZ5 524 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ACP6Q9NPH0 428 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ESM1Q9NQ30 184 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 MEPEQ9NQ76 525 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 ANAPC11Q9NYG5 84 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 NYAP2Q9P242 653 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 EIF3KQ9UBQ5 218 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 LSM7Q9UK45 103 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 RCL1Q9Y2P8 373 aaKnown RBP3.07□□□□□ -1.92
ITGB1-208ENST00000464001 USP16Q9Y5T5 823 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 V9GYY9 64 aa3.07□□□□□ -1.92
ITGB1-208ENST00000464001 FAM231BA6NCW3 169 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 SLC22A20A6NK97 555 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 F8VP50 259 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 H3BN98 237 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 K7EN84 100 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 TNFSF11O14788 317 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 LIN7AO14910 233 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 HAT1O14929 419 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 RAD51BO15315 384 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 AQP9O43315 295 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 CXCL13O43927 109 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 TOM1O60784 492 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 RCBTB2O95199 551 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 LDOC1O95751 146 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 OXTP01178 125 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 THY1P04216 161 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 KLK1P06870 262 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 SLC35E2BP0CK96 405 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 PSKH1P11801 424 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 MLNP12872 115 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 FASP25445 335 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 LMO2P25791 158 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 VHLP40337 213 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 CDKN2CP42773 168 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 KPNA2P52292 529 aaKnown RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 PEX3P56589 373 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 RPS27AP62979 156 aaKnown RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 SRPXP78539 464 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 CAPRIN1Q14444 709 aaKnown RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 ZBTB6Q15916 424 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms