RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 EXD3Q8N9H8 876 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 OR13C8Q8NGS7 320 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 MITD1Q8WV92 249 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 TMEM106AQ96A25 262 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 FAM3DQ96BQ1 224 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 GPR174Q9BXC1 333 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 TINAGL1Q9GZM7 467 aaPredicted RBP11.13□□□□□ -0.63
ITGB5-202ENST00000460797 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 TREM1Q9NP99 234 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 MKKSQ9NPJ1 570 aaPredicted RBP11.13□□□□□ -0.63
ITGB5-202ENST00000460797 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.13□□□□□ -0.63
ITGB5-202ENST00000460797 KLHDC2Q9Y2U9 406 aa11.13□□□□□ -0.63
ITGB5-202ENST00000460797 TMEM72A0PK05 275 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 F12P00748 615 aaPredicted RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 CD14P08571 375 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 RPS4XP62701 263 aaKnown RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 ATXN7L3Q14CW9 347 aaPredicted RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 MST1LQ2TV78 715 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 C2orf76Q3KRA6 126 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 ULK3Q6PHR2 472 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 C5orf46Q6UWT4 87 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 C12orf40Q86WS4 652 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 OR2G2Q8NGZ5 317 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 WFIKKN2Q8TEU8 576 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 SLC39A7Q92504 469 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 PTCHD1Q96NR3 888 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 ADAP2Q9NPF8 381 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 DNAJB12Q9NXW2 375 aaKnown RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 COL4A2P08572 1712 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 GOLGA4Q13439 2230 aaKnown RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 CCSO14618 274 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 SSX5O60225 188 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 GUSBP08236 651 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 ITGA5P08648 1049 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 FAM157CP0CG43 387 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 PEBP1P30086 187 aaKnown RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 CCR2P41597 374 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 PPICP45877 212 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 DMWDQ09019 674 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 RASGEF1BQ0VAM2 473 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 RNF212Q495C1 297 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 ARHGAP40Q5TG30 622 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 FAHD2BQ6P2I3 314 aaPredicted RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 CNKSR3Q6P9H4 555 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 FIGNL1Q6PIW4 674 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 UNQ6126/PRO20091Q6UXV3 157 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 NT5CQ8TCD5 201 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 INTS12Q96CB8 462 aaKnown RBP11.12□□□□□ -0.63
ITGB5-202ENST00000460797 RASD2Q96D21 266 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 FAHD2AQ96GK7 314 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 SEC22AQ96IW7 307 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 MNTQ99583 582 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 SMCO4Q9NRQ5 59 aa11.12□□□□□ -0.63
ITGB5-202ENST00000460797 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 A6NJ64 397 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 C1orf196B1AJZ1 125 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 GPR89AB7ZAQ6 455 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 M0QYG6 137 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 S100A6P06703 90 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 CISD3P0C7P0 127 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 GPR89BP0CG08 455 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 NFYBP25208 207 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 DDX6P26196 483 aaKnown RBP eCLIP11.11□□□□□ -0.635e-6■■■■□ 24.4
ITGB5-202ENST00000460797 CMPK1P30085 196 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 MEF2DQ14814 521 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 FNDC3BQ53EP0 1204 aaKnown RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 VN1R4Q7Z5H5 301 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 BPIFB2Q8N4F0 458 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ZNF676Q8N7Q3 588 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ZDHHC22Q8N966 263 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 OR4K17Q8NGC6 315 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 OR10AC1Q8NH08 325 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 SLC22A8Q8TCC7 542 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 OR8D1Q8WZ84 308 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ARSGQ96EG1 525 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ADAD1Q96M93 576 aaKnown RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ATG5Q9H1Y0 275 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 NIT2Q9NQR4 276 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 CYTL1Q9NRR1 136 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 METTL1Q9UBP6 276 aaKnown RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ZNF736B4DX44 427 aaPredicted RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ZNF208O43345 1280 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 LILRB3O75022 631 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ALOX12BO75342 701 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 CYB5AP00167 134 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 CRHP06850 196 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ZNF888P0CJ79 500 aaPredicted RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 FOSL1P15407 271 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 ABCD3P28288 659 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 TACR3P29371 465 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 EIF1AXP47813 144 aaKnown RBP11.11□□□□□ -0.63
ITGB5-202ENST00000460797 PRPS1P60891 318 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 EGR3Q06889 387 aa11.11□□□□□ -0.63
ITGB5-202ENST00000460797 AIMP2Q13155 320 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms