RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 LANCL3Q6ZV70 420 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 SLC35D2Q76EJ3 337 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 C15orf40Q8WUR7 153 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 DPYSL5Q9BPU6 564 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 FBXL3Q9UKT7 428 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 OR6C76A6NM76 312 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 G3V3Q6 166 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 DUX1O43812 170 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 ETFDHQ16134 617 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 C1orf140Q5VVS0 124 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 FAAP20Q6NZ36 180 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 ZNF679Q8IYX0 411 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 IRF2BPLQ9H1B7 796 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 SCP2D1Q9UJQ7 156 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 SEC16AO15027 2179 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 A0A1B0GUH1 482 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 XRCC3O43542 346 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 SLC16A7O60669 478 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 TSC22D2O75157 780 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 PNPP00491 289 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 HLA-DQA2P01906 255 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 TPOP07202 933 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 CTLA4P16410 223 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 SELENOPP49908 381 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 LINC00303Q3SY05 128 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 GRINAQ7Z429 371 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ZNF227Q86WZ6 799 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 RNF128Q8TEB7 428 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ASB17Q8WXJ9 295 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 C8orf44Q96CB5 159 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ZNF501Q96CX3 271 aaPredicted RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 NPDC1Q9NQX5 325 aaPredicted RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ALPK2Q86TB3 2170 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 MYO15AQ9UKN7 3530 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 PLPP3O14495 311 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ARPC1BO15143 372 aaKnown RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 IGHMP01871 453 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ROM1Q03395 351 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 C19orf57Q0VDD7 668 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 SMAD4Q13485 552 aaKnown RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 UBXN2BQ14CS0 331 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 LGALSLQ3ZCW2 172 aaPredicted RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ASPHD2Q6ICH7 369 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 TEX261Q6UWH6 196 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 OR8H1Q8NGG4 311 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 UTP23Q9BRU9 249 aaKnown RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 ZNF436Q9C0F3 470 aaPredicted RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 OR11A1Q9GZK7 315 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 NOX3Q9HBY0 568 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 CTSFQ9UBX1 484 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 SLC22A13Q9Y226 551 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 U3KQ87 197 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 TP53BP1Q12888 1972 aaPredicted RBP14.42□□□□□ -0.1
SHQ1-202ENST00000444040 SLC22A23A1A5C7 686 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 MYF5P13349 255 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 IGFBP4P22692 258 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 DNASE1P24855 282 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 FOXL2P58012 376 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 METTL11BQ5VVY1 283 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 MAMSTRQ6ZN01 415 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 TDHQ8IZJ6 230 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 SLC25A45Q8N413 288 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 PLPP5Q8NEB5 264 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 OR51D1Q8NGF3 324 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 DUSP19Q8WTR2 217 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 PIGKQ92643 395 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 PCDHGA5Q9Y5G8 931 aa14.42□□□□□ -0.1
SHQ1-202ENST00000444040 GIMD1P0DJR0 217 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 GLB1P16278 677 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 RAD52P43351 418 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 SLC18B1Q6NT16 456 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 ANKRD16Q6P6B7 361 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 GLDNQ6ZMI3 551 aaPredicted RBP14.41□□□□□ -0.1
SHQ1-202ENST00000444040 NLRC3Q7RTR2 1065 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 STK35Q8TDR2 534 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 PPP1R14AQ96A00 147 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 SORCS2Q96PQ0 1159 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 ZNF587Q96SQ5 575 aaPredicted RBP14.41□□□□□ -0.1
SHQ1-202ENST00000444040 SLC22A11Q9NSA0 550 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 FGF21Q9NSA1 209 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 VCANP13611 3396 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 PCNX3Q9H6A9 2034 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 ICMTO60725 284 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 ITGA5P08648 1049 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 CCKBRP32239 447 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 CENPAP49450 140 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 MECP2P51608 486 aaKnown RBP14.41□□□□□ -0.1
SHQ1-202ENST00000444040 EFNB2P52799 333 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 BLVRAP53004 296 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 PRSS42Q7Z5A4 293 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 BIVMQ86UB2 503 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 TSEN15Q8WW01 171 aaKnown RBP14.41□□□□□ -0.1
SHQ1-202ENST00000444040 THRSPQ92748 146 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 FOXQ1Q9C009 403 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 METTL17Q9H7H0 456 aaPredicted RBP14.41□□□□□ -0.1
SHQ1-202ENST00000444040 B3GNT2Q9NY97 397 aa14.41□□□□□ -0.1
SHQ1-202ENST00000444040 FTCDNL1E5RQL4 147 aa14.4□□□□□ -0.1
SHQ1-202ENST00000444040 CTAG2O75638 210 aa14.4□□□□□ -0.1
SHQ1-202ENST00000444040 WNT11O96014 354 aa14.4□□□□□ -0.1
SHQ1-202ENST00000444040 ALDOBP05062 364 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms