RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PTHP01270 115 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 CD55P08174 381 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 PPIAL4GP0DN37 164 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 DRD4P21917 467 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 SLC6A9P48067 706 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 PAX8Q06710 450 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 SRSF4Q08170 494 aaKnown RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 SLC36A2Q495M3 483 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 SPRNQ5BIV9 151 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 C16orf87Q6PH81 154 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 SLC35D2Q76EJ3 337 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF771Q7L3S4 317 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 CPEB3Q8NE35 698 aaKnown RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 OR5J2Q8NH18 312 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 WFDC12Q8WWY7 111 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 SLC25A44Q96H78 314 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 ZBTB18Q99592 522 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 CITED1Q99966 193 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 ROPN1BQ9BZX4 212 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 ROPN1Q9HAT0 212 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 PATZ1Q9HBE1 687 aaKnown RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
HMGN1-208ENST00000443046 TESQ9UGI8 421 aaKnown RBP12.14□□□□□ -0.47
HMGN1-208ENST00000443046 ISPDA4D126 451 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 ZSCAN5BA6NJL1 495 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-208ENST00000443046 SPRY3O43610 288 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 SERPINI2O75830 405 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 PGA4P0DJD7 388 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 PGA3P0DJD8 388 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 ADORA3P0DMS8 318 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 HOXB9P17482 250 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-208ENST00000443046 MPV17P39210 176 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 PAX2Q02962 417 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 HNRNPA0Q13151 305 aaKnown RBP12.13□□□□□ -0.47
HMGN1-208ENST00000443046 OR1Q1Q15612 314 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 MBNL2Q5VZF2 373 aaKnown RBP12.13□□□□□ -0.47
HMGN1-208ENST00000443046 MSANTD1Q6ZTZ1 278 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 RHOUQ7L0Q8 258 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF101Q8IZC7 436 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 IPCEF1Q8WWN9 437 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF566Q969W8 418 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 WFDC6Q9BQY6 131 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 LRMDAQ9H2I8 198 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 RNF121Q9H920 327 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 DCAF16Q9NXF7 216 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 EGFL7Q9UHF1 273 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 TRIM33Q9UPN9 1127 aa12.13□□□□□ -0.47
HMGN1-208ENST00000443046 SOX21Q9Y651 276 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-208ENST00000443046 A0A1B0GUS0 222 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 IQCMA0A1B0GVH7 501 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 C11orf98E9PRG8 122 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 SLC22A3O75751 556 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 ANP32DO95626 131 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 PLATP00750 562 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 QDPRP09417 244 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 IGHV4-38-2P0DP08 117 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 OMGP23515 440 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 CD80P33681 288 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 LIPAP38571 399 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 WNT5AP41221 380 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 MTNR1AP48039 350 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 CDH12P55289 794 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
HMGN1-208ENST00000443046 PLP2Q04941 152 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 FADDQ13158 208 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF718Q3SXZ3 478 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 THEM4Q5T1C6 240 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
HMGN1-208ENST00000443046 HIST2H2BDQ6DRA6 164 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 LRRC28Q86X40 367 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-208ENST00000443046 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 RBM15BQ8NDT2 890 aaKnown RBP12.12□□□□□ -0.47
HMGN1-208ENST00000443046 ITCHQ96J02 903 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 POM121L2Q96KW2 1035 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 SEPHS2Q99611 448 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 MRI1Q9BV20 369 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 EGLN1Q9GZT9 426 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 MS4A7Q9GZW8 240 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-208ENST00000443046 MMP27Q9H306 513 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 CYSLTR2Q9NS75 346 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 ZDHHC8Q9ULC8 765 aa12.12□□□□□ -0.47
HMGN1-208ENST00000443046 PLSCR5A0PG75 271 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 MGRN1O60291 552 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 ICMTO60725 284 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 SBK2P0C263 348 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 IDO1P14902 403 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 EPHA3P29320 983 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF362Q5T0B9 420 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-208ENST00000443046 SPICQ8N5J4 248 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
HMGN1-208ENST00000443046 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms