RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, human

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-208	ENST00000442054	PTP4A1	Q93096	173 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SCMH1	Q96GD3	660 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF845	Q96IR2	970 aa	Predicted RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MTHFD2L	Q9H903	347 aa	Predicted RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	HINT3	Q9NQE9	182 aa	Known RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ALPK2	Q86TB3	2170 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF407	Q9C0G0	2248 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054		A0A087WV62	115 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	HOXD4	P09016	255 aa	Predicted RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	AZGP1	P25311	298 aa	Known RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	COL8A1	P27658	744 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CHRNB4	P30926	498 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	OPRM1	P35372	400 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	PON3	Q15166	354 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	TATDN3	Q17R31	274 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	C9orf135	Q5VTT2	229 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CASP12	Q6UXS9	341 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DNM1P46	Q6ZS02	220 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SHF	Q7M4L6	423 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	YIPF7	Q8N8F6	280 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	OR9Q1	Q8NGQ5	310 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	TMEM203	Q969S6	136 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MS4A3	Q96HJ5	214 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	TMEM246	Q9BRR3	403 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	PAQR5	Q9NXK6	330 aa	Predicted RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	EMC3	Q9P0I2	261 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SLC35A3	Q9Y2D2	325 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MED12	Q93074	2177 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MPDZ	O75970	2070 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FABP12	A6NFH5	140 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	PLPP2	O43688	288 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MRPL33	O75394	65 aa	Known RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	APOL3	O95236	402 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DBI	P07108	87 aa	Known RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SRD5A2	P31213	254 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SLC6A8	P48029	635 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MXD1	Q05195	221 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	PGGHG	Q32M88	737 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZFP69	Q49AA0	526 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CCDC58	Q4VC31	144 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	NIPAL3	Q6P499	406 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF619	Q8N2I2	560 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	PSMF1	Q92530	271 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DDIT4L	Q96D03	193 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FAM46A	Q96IP4	442 aa	Known RBP	6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FRMD6	Q96NE9	622 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	GFI1	Q99684	422 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	TEX12	Q9BXU0	123 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	GON7	Q9BXV9	100 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ST6GALNAC2	Q9UJ37	374 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	NPTN	Q9Y639	398 aa		6.63	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ANKRD61	A6NGH8	418 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SERINC4	A6NH21	518 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054		E9PI62	339 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ADAM11	O75078	769 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CBX7	O95931	251 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	IFI6	P09912	130 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SAG	P10523	405 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF85	Q03923	595 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FUT7	Q11130	342 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DDI2	Q5TDH0	399 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SP5	Q6BEB4	398 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FAM131A	Q6UXB0	335 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DGAT2L6	Q6ZPD8	337 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF440	Q8IYI8	595 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	OR8H2	Q8N162	312 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF808	Q8N4W9	903 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	TMEM255B	Q8WV15	326 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	SECISBP2	Q96T21	854 aa	Known RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FNDC11	Q9BVV2	318 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DUSP22	Q9NRW4	184 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FRS3	O43559	492 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	RNF13	O43567	381 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CLDN14	O95500	239 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ACTL6A	O96019	429 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	EIF4E	P06730	217 aa	Known RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FBXO45	P0C2W1	286 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CD53	P19397	219 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MAK	P20794	623 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	PTN	P21246	168 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	CFL1	P23528	166 aa	Known RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MTNR1B	P49286	362 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DBP	Q10586	325 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	QPRT	Q15274	297 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	TAB1	Q15750	504 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MAPK14	Q16539	360 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ARHGAP11B	Q3KRB8	267 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	EEF1A1P5	Q5VTE0	462 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZNF836	Q6ZNA1	936 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ANGPTL6	Q8NI99	470 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	FAM57A	Q8TBR7	257 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	ACOT11	Q8WXI4	607 aa	Predicted RBP	6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	MARVELD3	Q96A59	401 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	DMRTB1	Q96MA1	342 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	IGKV3D-11	A0A0A0MRZ8	115 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	IRGM	A1A4Y4	181 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054	AHRR	A9YTQ3	701 aa		6.62	□□□□□ -1.35
CDC42BPA-208	ENST00000442054		H3BN98	237 aa		6.62	□□□□□ -1.35

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