RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 A0A1W2PPL8 197 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 NDUFB6O95139 128 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 OR6A2O95222 327 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 CD3DP04234 171 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 IFNGR1P15260 489 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 PPICP45877 212 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 CCINQ13939 588 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 C2orf76Q3KRA6 126 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 EEF1A1P5Q5VTE0 462 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF227Q86WZ6 799 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF440Q8IYI8 595 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 GPR119Q8TDV5 335 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 THAP3Q8WTV1 239 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 TTC9Q92623 222 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 NUDT9Q9BW91 350 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 PDE7BQ9NP56 450 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 LANCL2Q9NS86 450 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 CGGBP1Q9UFW8 167 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 B9D1Q9UPM9 204 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 SPEF1Q9Y4P9 236 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 FXYD6-FXYD2A0A087WZ82 144 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 DCDC2BA2VCK2 349 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 IFI6P09912 130 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 IL12BP29460 328 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 RORAP35398 523 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 MFGE8Q08431 387 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 SEZ6L2Q6UXD5 910 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 SDR16C5Q8N3Y7 309 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 PMEPA1Q969W9 287 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 LCORQ96JN0 433 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 C4orf45Q96LM5 186 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 CMTM3Q96MX0 182 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 FXYD6Q9H0Q3 95 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 ATG5Q9H1Y0 275 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 PTTG3PQ9NZH4 202 aa12.24□□□□□ -0.45
HERPUD1-204ENST00000439977 IGHV3-20A0A0C4DH32 117 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 A0A1W2PPC4 97 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 NAP1L6A6NFF2 107 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 GGT3PA6NGU5 568 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 SHISA7A6NL88 538 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 TMEM150CB9EJG8 249 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 XRCC3O43542 346 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 PRAF2O60831 178 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 CTAG2O75638 210 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC25A12O75746 678 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 CTLA4P16410 223 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 IL11P20809 199 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 LTBRP36941 435 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 BLKP51451 505 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 NSDHLQ15738 373 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ELFN2Q5R3F8 820 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ARHGAP40Q5TG30 622 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 DCAF12L2Q5VW00 463 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF626Q68DY1 528 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ASPHD2Q6ICH7 369 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 OTOSQ8NHW6 89 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 NPAS1Q99742 590 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 TBL1XR1Q9BZK7 514 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 GSX2Q9BZM3 304 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 MSRAQ9UJ68 235 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 SULT1B1O43704 296 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF254O75437 659 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 CSN2P05814 226 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 DMDP11532 3685 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF35P13682 527 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 GABRA4P48169 554 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ADAM8P78325 824 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 AANATQ16613 207 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 NDUFAF7Q7L592 441 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF627Q7L945 461 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 COQ8AQ8NI60 647 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF417Q8TAU3 575 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 FAM3DQ96BQ1 224 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 CUTCQ9NTM9 273 aa12.23□□□□□ -0.45
HERPUD1-204ENST00000439977 CABIN1Q9Y6J0 2220 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 PLSCR5A0PG75 271 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 TMEM212A6NML5 194 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 GOSR2O14653 212 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 LIPCP11150 499 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 INSM1Q01101 510 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 SERTAD2Q14140 314 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 SMAD2Q15796 467 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 WDR45BQ5MNZ6 344 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 B3GNTL1Q67FW5 361 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 OLFML2AQ68BL7 652 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 C11orf88Q6PI97 169 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 TMED4Q7Z7H5 227 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 MUC20Q8N307 709 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 OR51A2Q8NGJ7 313 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 NKD1Q969G9 470 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 DIABLOQ9NR28 239 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 FBXL3Q9UKT7 428 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 PCNX3Q9H6A9 2034 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 LOC100509620A0A075B734 347 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 C2CD4DB7Z1M9 353 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 H7C417 338 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms