RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 TMEM53Q6P2H8 277 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF771Q7L3S4 317 aaPredicted RBP11.52□□□□□ -0.57
LINC00028-201ENST00000435497 KRT73Q86Y46 540 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 FUNDC1Q8IVP5 155 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 GOLGA6L1Q8N7Z2 621 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 ICA1LQ8NDH6 482 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 CPEB3Q8NE35 698 aaKnown RBP11.52□□□□□ -0.57
LINC00028-201ENST00000435497 CCL17Q92583 94 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF566Q969W8 418 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 C1orf147Q96MC9 270 aaPredicted RBP11.52□□□□□ -0.57
LINC00028-201ENST00000435497 DUX5Q96PT3 197 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 CENPHQ9H3R5 247 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 C1orf198Q9H425 327 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 SAP30LQ9HAJ7 183 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 LEF1Q9UJU2 399 aaPredicted RBP11.52□□□□□ -0.57
LINC00028-201ENST00000435497 GMEB1Q9Y692 573 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 WNK1Q9H4A3 2382 aa11.52□□□□□ -0.57
LINC00028-201ENST00000435497 TRBV5-3A0A0A0MS03 114 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 M0R3H8 397 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 TPD52L2O43399 206 aaKnown RBP11.51□□□□□ -0.57
LINC00028-201ENST00000435497 UBOX5O94941 541 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 OR6A2O95222 327 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 FARS2O95363 451 aaKnown RBP11.51□□□□□ -0.57
LINC00028-201ENST00000435497 PRTN3P24158 256 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 AQP1P29972 269 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 RBMXP38159 391 aaKnown RBP11.51□□□□□ -0.57
LINC00028-201ENST00000435497 MPV17P39210 176 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF81P51508 661 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 SCARB2Q14108 478 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 NPTX1Q15818 432 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 MOGQ16653 247 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 KLF17Q5JT82 389 aaPredicted RBP11.51□□□□□ -0.57
LINC00028-201ENST00000435497 DOK3Q7L591 496 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 SLC16A14Q7RTX9 510 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 DPPA2Q7Z7J5 298 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 RETREG3Q86VR2 466 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
LINC00028-201ENST00000435497 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
LINC00028-201ENST00000435497 DEFB108BQ8NET1 73 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 OR1J2Q8NGS2 313 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 OR1J1Q8NGS3 322 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 MCHR2Q969V1 340 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 ELMOD3Q96FG2 381 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF347Q96SE7 839 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 MCHR1Q99705 422 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 GAL3ST1Q99999 423 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 TMEM38AQ9H6F2 299 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 MMP26Q9NRE1 261 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 DCAF16Q9NXF7 216 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF69Q9UC07 566 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 TRIM33Q9UPN9 1127 aa11.51□□□□□ -0.57
LINC00028-201ENST00000435497 TANC2Q9HCD6 1990 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PPIAL4CA0A0B4J2A2 164 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PRORSD1PA6NEY8 169 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 RNF13O43567 381 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 SPRY3O43610 288 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 CHP2O43745 196 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ENTPD5O75356 428 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PTHP01270 115 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PPIAL4FP0DN26 164 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 GPX2P18283 190 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 WNT5AP41221 380 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 MRPL19P49406 292 aaKnown RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 DUSP7Q16829 419 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 SLC36A2Q495M3 483 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 FAM209AQ5JX71 171 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 CEP85LQ5SZL2 805 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 THEM4Q5T1C6 240 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF613Q6PF04 617 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 RANBP3LQ86VV4 465 aaPredicted RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 RBM45Q8IUH3 476 aaKnown RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ARMC8Q8IUR7 673 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF101Q8IZC7 436 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 LRRC18Q8N456 261 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 SMYD1Q8NB12 490 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 RBM15BQ8NDT2 890 aaKnown RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 GPR32P1Q8NGA4 272 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 OR4D11Q8NGI4 311 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 OR6T1Q8NGN1 323 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 MARS2Q96GW9 593 aaKnown RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF48Q96MX3 618 aaPredicted RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ZNF607Q96SK3 696 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 ARHGDIGQ99819 225 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 MRPL13Q9BYD1 178 aaKnown RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 KLHL21Q9UJP4 597 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 VWFP04275 2813 aa11.5□□□□□ -0.57
LINC00028-201ENST00000435497 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
LINC00028-201ENST00000435497 LOC100509620A0A075B734 347 aa11.49□□□□□ -0.57
LINC00028-201ENST00000435497 TMEM120BA0PK00 339 aa11.49□□□□□ -0.57
LINC00028-201ENST00000435497 DNAJC9-AS1A6NH13 148 aa11.49□□□□□ -0.57
LINC00028-201ENST00000435497 ZSCAN5BA6NJL1 495 aa11.49□□□□□ -0.57
LINC00028-201ENST00000435497 TRAPPC2LH3BP13 241 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms