RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CTHP32929 405 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 MAP3K8P41279 467 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 HLA-DQA1Q5Y7H0 255 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 C3orf33Q6P1S2 294 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 FAM199XQ6PEV8 388 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 UQCC3Q6UW78 93 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 SLC29A4Q7RTT9 530 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 EIF4E3Q8N5X7 224 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ACOT4Q8N9L9 421 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF511Q8NB15 262 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OR4K14Q8NGD5 310 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 SP7Q8TDD2 431 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 FGF14Q92915 247 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ISOC2Q96AB3 205 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 HAVCR1Q96D42 359 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 NMNAT3Q96T66 252 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 SGPP1Q9BX95 441 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ACTRT3Q9BYD9 372 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OR52A5Q9H2C5 316 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 KCNK15Q9H427 330 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 MTHFD2LQ9H903 347 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 MRPS17Q9Y2R5 130 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 TVP23AA6NH52 213 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF736B4DX44 427 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 CLDN4O14493 209 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 CDC40O60508 579 aaKnown RBP eCLIP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ICOSLGO75144 302 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 MED6O75586 246 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 PMS2P2O95744 297 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 EFEMP2O95967 443 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ZGLP1P0C6A0 271 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OR2T7P0C7T2 308 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 PGAM2P15259 253 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 RAB6AP20340 208 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 AVPR2P30518 371 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ACTBP60709 375 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ACTG1P63261 375 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 DHODHQ02127 395 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 NCMAPQ5T1S8 102 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 MRPL2Q5T653 305 aaKnown RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OR10K2Q6IF99 312 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ALKBH2Q6NS38 261 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 C11orf87Q6NUJ2 197 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 RPL13AP3Q6NVV1 102 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF761Q86XN6 746 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF584Q8IVC4 421 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OR6N2Q8NGY6 317 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 OR2T27Q8NH04 317 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 TMEM106AQ96A25 262 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 PTCHD1Q96NR3 888 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 CMKLR1Q99788 373 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 C8orf33Q9H7E9 229 aaPredicted RBP6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 KCNK7Q9Y2U2 307 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF337Q9Y3M9 751 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 ADAM18Q9Y3Q7 739 aa6.77□□□□□ -1.33
SYNPO2-203ENST00000434046 PTPRDP23468 1912 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 TMEM72A0PK05 275 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 GMFGO60234 142 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 GPRIN2O60269 458 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 GAAP10253 952 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 F3P13726 295 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 HIST1H1TP22492 207 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 TNFRSF4P43489 277 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 PCBP4P57723 403 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 RPS15AP62244 130 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 RNF212Q495C1 297 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 RNASE10Q5GAN6 216 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 OR52W1Q6IF63 320 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 STAC2Q6ZMT1 411 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF836Q6ZNA1 936 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 TTLL10Q6ZVT0 673 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 PXKQ7Z7A4 578 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 RNASE11Q8TAA1 199 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 MIB2Q96AX9 1013 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 ELSPBP1Q96BH3 223 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 LCORQ96JN0 433 aaPredicted RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 PAPOLGQ9BWT3 736 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 SELENOIQ9C0D9 397 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 EIF5A2Q9GZV4 153 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 WDR13Q9H1Z4 485 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 METTL8Q9H825 291 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 FGF22Q9HCT0 170 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 UFSP2Q9NUQ7 469 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 C2orf74A8MZ97 194 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 AIFM1O95831 613 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 NUDT14O95848 222 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 PRH1P02810 166 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 DAOP14920 347 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 ABCD3P28288 659 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 RPS27P42677 84 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 POU3F4P49335 361 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 SNRPNP63162 240 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF616Q08AN1 781 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 TGIF1Q15583 401 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 ELAVL1Q15717 326 aaKnown RBP6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 ZNF528Q3MIS6 628 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 OTPQ5XKR4 325 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 FIGLAQ6QHK4 219 aa6.76□□□□□ -1.33
SYNPO2-203ENST00000434046 Q6ZSR6 202 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms