RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PTPN6P29350 595 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 P2RY14Q15391 338 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 PTOV1Q86YD1 416 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF610Q8N9Z0 462 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 OR5AK2Q8NH90 309 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 SARGQ9BW04 601 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 SMIM3Q9BZL3 60 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 HDGFL3Q9Y3E1 203 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 IGHV1-45A0A0A0MS14 117 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF681Q96N22 645 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 ARL6Q9H0F7 186 aa11.74□□□□□ -0.53
PTCH1-207ENST00000429896 OR6C6A6NF89 314 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 TRIM64CA6NLI5 447 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 CD14P08571 375 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 MAP2K6P52564 334 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 SOX8P57073 446 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 HSF1Q00613 529 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF704Q6ZNC4 412 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ASB17Q8WXJ9 295 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 CPNE4Q96A23 557 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 PAK1IP1Q9NWT1 392 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 MAGED1Q9Y5V3 778 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 SPINK2P20155 84 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 CD34P28906 385 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF169Q14929 603 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 GPR155Q7Z3F1 870 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 OR6C65A6NJZ3 312 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 RPL27P61353 136 aaKnown RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 GNRHR2Q96P88 292 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 SLC19A3Q9BZV2 496 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 AK6Q9Y3D8 172 aaKnown RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 PRAMEF4O60810 478 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 GIPRP48546 466 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 PRAMEF9Q5VWM5 478 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 TMPRSS7Q7RTY8 843 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 LRFN5Q96NI6 719 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 OXGR1Q96P68 337 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 EDARQ9UNE0 448 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ANKRD34BA5PLL1 514 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 PET100P0DJ07 73 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 CHMP24386 653 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 MLF1P58340 268 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 TMEM211Q6ICI0 200 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 OR52W1Q6IF63 320 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF321PQ8N8H1 164 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF845Q96IR2 970 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-207ENST00000429896 OR5B12Q96R08 314 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 MAB21L2Q9Y586 359 aa11.73□□□□□ -0.53
PTCH1-207ENST00000429896 TRAV18A0A075B6X5 111 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 MPIG6BO95866 241 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 MT-ND2P03891 347 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 CAV2P51636 162 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 HSD17B8Q92506 261 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 TSNAXQ99598 290 aaKnown RBP11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ALG8Q9BVK2 526 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 SEC14L4Q9UDX3 406 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 FOXK2Q01167 660 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 FUT7Q11130 342 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 TUBA3EQ6PEY2 450 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 FRZBQ92765 325 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 NMNAT3Q96T66 252 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 BCL7BQ9BQE9 202 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 SULT4A1Q9BR01 284 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ASF1BQ9NVP2 202 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 CDHR4A6H8M9 788 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ALG1L2C9J202 215 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 OR8U9P0C7N5 309 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 TGIF1Q15583 401 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF687Q8N1G0 1237 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 BATF2Q8N1L9 274 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 OR56B2PQ8NGI1 322 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ARSGQ96EG1 525 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 CHRNA10Q9GZZ6 450 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 RNF32Q9H0A6 362 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 FITM1A5D6W6 292 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 SLC37A1P57057 533 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 PLCXD3Q63HM9 321 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 KDM8Q8N371 416 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ITFG2Q969R8 447 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 PLEKHJ1Q9NW61 149 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 IGHV3-15A0A0B4J1V0 119 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 FAM183AA6NL82 134 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 SPDEFO95238 335 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 SRD5A2P31213 254 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF674Q2M3X9 581 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 C15orf40Q8WUR7 153 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 ABRACLQ9P1F3 81 aa11.72□□□□□ -0.53
PTCH1-207ENST00000429896 DVL2O14641 736 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms