RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ZFP1Q6P2D0 407 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 OPN5Q6U736 354 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ANGPTL8Q6UXH0 198 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF836Q6ZNA1 936 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 TUBA1AQ71U36 451 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 C16orf62Q7Z3J2 963 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 VRK2Q86Y07 508 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 RBM45Q8IUH3 476 aaKnown RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 LACC1Q8IV20 430 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 FADS6Q8N9I5 356 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 WDSUB1Q8N9V3 476 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 SMYD1Q8NB12 490 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 MDS2Q8NDY4 140 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 OR10G3Q8NGC4 313 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 OR4C15Q8NGM1 316 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 OR6T1Q8NGN1 323 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 OR52P1PQ8NH57 321 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 SECTM1Q8WVN6 248 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 RASSF5Q8WWW0 418 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 FIG4Q92562 907 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 CNOT9Q92600 299 aaKnown RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 EFHD2Q96C19 240 aaPredicted RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF354BQ96LW1 612 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 GAL3ST4Q96RP7 486 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF607Q96SK3 696 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 TUBA1CQ9BQE3 449 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 PINK1Q9BXM7 581 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ANGPTL4Q9BY76 406 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ING2Q9H160 280 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 UBQLN3Q9H347 655 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 CXorf56Q9H5V9 222 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 LIN28AQ9H9Z2 209 aaKnown RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 UBTD1Q9HAC8 227 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ZBTB20Q9HC78 741 aaPredicted RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 S100A14Q9HCY8 104 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 AGPAT4Q9NRZ5 378 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 MAN2C1Q9NTJ4 1040 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 RPS6KA6Q9UK32 745 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 A4GNTQ9UNA3 340 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 ZNF443Q9Y2A4 671 aaPredicted RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 NTNG1Q9Y2I2 539 aa4.84□□□□□ -1.63
C9orf3-205ENST00000427193 KLF2Q9Y5W3 355 aaPredicted RBP4.84□□□□□ -1.63
C9orf3-205ENST00000427193 MXRA5Q9NR99 2828 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 NPIPA5A0A0B4J1W7 369 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 NPIPA7E9PJI5 369 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CASQ2O14958 399 aaPredicted RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 EIF4E2O60573 245 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 NPIPB7O75200 414 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 FKBP6O75344 327 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 GLSO94925 669 aaPredicted RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 WDPCPO95876 746 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 IFNA14P01570 189 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 OPN1SWP03999 348 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 NPIPA8P0DM63 369 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CCL3P10147 92 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MTNR1AP48039 350 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 TMED10P49755 219 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 SSR4P51571 173 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 PLCXD2Q0VAA5 305 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 EPS8Q12929 822 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MFAP5Q13361 173 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 GK3PQ14409 553 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ATP6AP1Q15904 470 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MEP1AQ16819 746 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 LIN52Q52LA3 116 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 GPAT3Q53EU6 434 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 LRRC23Q53EV4 343 aaPredicted RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 IFI44LQ53G44 452 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF311Q5JNZ3 666 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MRPL2Q5T653 305 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF770Q6IQ21 691 aaPredicted RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 LIN54Q6MZP7 749 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CBLN3Q6UW01 205 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ISLR2Q6UXK2 745 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 SZRD1Q7Z422 152 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CARM1Q86X55 608 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MISPQ8IVT2 679 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 PEX5LQ8IYB4 626 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 PRR22Q8IZ63 422 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 BEST3Q8N1M1 668 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CLEC1AQ8NC01 280 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 FDCSPQ8NFU4 85 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 OR10Q1Q8NGQ4 319 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 SLC22A8Q8TCC7 542 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 GEMIN6Q8WXD5 167 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF300Q96RE9 604 aaPredicted RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 PSD2Q9BQI7 771 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 PRSS27Q9BQR3 290 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CHID1Q9BWS9 393 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 TRIM15Q9C019 465 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 POLR2J2Q9GZM3 115 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 LAT2Q9GZY6 243 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 DCLRE1BQ9H816 532 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 RNPEPL1Q9HAU8 725 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CHST11Q9NPF2 352 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 DEPPQ9NTK1 212 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ACER3Q9NUN7 267 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ADPRHL2Q9NX46 363 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 VNN3Q9NY84 501 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms