RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TSPAN32Q96QS1 320 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ADOQ96SZ5 270 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 GAS2L1Q99501 681 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 POFUT1Q9H488 388 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TAS2R8Q9NYW2 309 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF230Q9UIE0 474 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM212A6NML5 194 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 KRBOX1C9JBD0 128 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SCDO00767 359 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 XKRYO14609 159 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 B3GALNT1O75752 331 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 RLN2P04090 185 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 POU2F2P09086 479 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SPARCP09486 303 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 PNMTP11086 282 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 CTSEP14091 401 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ACHEP22303 614 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TNFRSF4P43489 277 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 KIR3DL2P43630 455 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 GPR3P46089 330 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 HHEXQ03014 270 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 EGR4Q05215 589 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 BIKQ13323 160 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF660Q6AZW8 331 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 OR10K2Q6IF99 312 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ATG4DQ86TL0 474 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 BIVMQ86UB2 503 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF321PQ8N8H1 164 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 OR6N1Q8NGY5 312 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 RPS4Y2Q8TD47 263 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TAAR8Q969N4 342 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 NARS2Q96I59 477 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 DCBLD2Q96PD2 775 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 GAL3ST4Q96RP7 486 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 OR8D2Q9GZM6 311 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM185BQ9H7F4 350 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 APMAPQ9HDC9 416 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 CGGBP1Q9UFW8 167 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC6A5Q9Y345 797 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM272A0A1B0GTI8 110 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 HMSDA8MTL9 139 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 B4DGG1 531 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 C5orf67F2Z3F1 127 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 CDC40O60508 579 aaKnown RBP eCLIP6.81□□□□□ -1.323e-6■■■□□ 17.2
SMARCC1-202ENST00000425518 SDC3O75056 442 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 RAB3DO95716 219 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 DEFA5Q01523 94 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ISXQ2M1V0 245 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 KLHL26Q53HC5 615 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 B3GNTL1Q67FW5 361 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ELP2Q6IA86 826 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM205Q6UW68 189 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 C17orf107Q6ZR85 190 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 NDUFAF7Q7L592 441 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF546Q86UE3 836 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF595Q8IYB9 648 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 EXD3Q8N9H8 876 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ELSPBP1Q96BH3 223 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 SEC22AQ96IW7 307 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 MRGPRX1Q96LB2 322 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 PTDSS2Q9BVG9 487 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 TINAGL1Q9GZM7 467 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 SHARPINQ9H0F6 387 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 UBQLN4Q9NRR5 601 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 FBXO4Q9UKT5 387 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 MPDZO75970 2070 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM25EA8MYX2 175 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 C17orf105B2RV13 164 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 HCRTR2O43614 444 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 FOXS1O43638 330 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF254O75437 659 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 PLATP00750 562 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 AMY2AP04746 511 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 AKT2P31751 481 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 PBX2P40425 430 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 TAF13Q15543 124 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 NKPD1Q17RQ9 610 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 MDGA2Q7Z553 956 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 GABRG1Q8N1C3 465 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 BEST3Q8N1M1 668 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 C12orf45Q8N5I9 185 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 LRRC75AQ8NAA5 344 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 BVESQ8NE79 360 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 HOXB13Q92826 284 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 C4orf45Q96LM5 186 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 GPX7Q96SL4 187 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 UTP23Q9BRU9 249 aaKnown RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 PDCD10Q9BUL8 212 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC19A3Q9BZV2 496 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 NRSN2Q9GZP1 204 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 MUC22E2RYF6 1773 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 TRBV5-7A0A0A0MS05 114 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 OR6C65A6NJZ3 312 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF264O43296 627 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC16A7O60669 478 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF432O94892 652 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 HOXC4P09017 264 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF28P17035 718 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 CXCR1P25024 350 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 STARP49675 285 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms