RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 TTC29Q8NA56 475 aaPredicted RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 ZNF540Q8NDQ6 660 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 DUSP18Q8NEJ0 188 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 FBXO30Q8TB52 745 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 NDRG1Q92597 394 aaKnown RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 KIAA1143Q96AT1 154 aaPredicted RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 PDXPQ96GD0 296 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 PYURFQ96I23 114 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 ART5Q96L15 291 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 Q96MT0 163 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 COL21A1Q96P44 957 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 PPP1R2P1Q96PQ5 205 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 RAB40CQ96S21 281 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 ZNF382Q96SR6 550 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 COQ7Q99807 217 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 ASCL2Q99929 193 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 SPAG8Q99932 426 aaPredicted RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 FICDQ9BVA6 458 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 CDCA4Q9BXL8 241 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 TEX13BQ9BXU2 312 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 C6orf62Q9GZU0 229 aaPredicted RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 CXCL16Q9H2A7 254 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 MIXL1Q9H2W2 232 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 MED20Q9H944 212 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 B3GAT2Q9NPZ5 323 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 C1orf109Q9NX04 203 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 ZNF226Q9NYT6 803 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 MAT2BQ9NZL9 334 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 THAP10Q9P2Z0 257 aaPredicted RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 DIMT1Q9UNQ2 313 aaKnown RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 LSM2Q9Y333 95 aaKnown RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 WIPI2Q9Y4P8 454 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 GMPPBQ9Y5P6 360 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 CLCA3PQ9Y6N3 262 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 RNF215Q9Y6U7 377 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 DICER1Q9UPY3 1922 aaKnown RBP4.26□□□□□ -1.73
RFC4-204ENST00000417876 SBF1O95248 1867 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 PLXNA1Q9UIW2 1896 aa4.26□□□□□ -1.73
RFC4-204ENST00000417876 ZSWIM8A7E2V4 1837 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 A0A096LPI6 279 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 OR5H15A6NDH6 313 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ASB14A6NK59 587 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 E2F3O00716 465 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CCSO14618 274 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 TNFSF12O43508 249 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 KIAA0513O60268 411 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 NOS1APO75052 506 aaPredicted RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 SOCS5O75159 536 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 B3GALNT1O75752 331 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 SLC22A5O76082 557 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 PDGFBP01127 241 aaPredicted RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 IGLV3-25P01717 112 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 HLA-DQB2P05538 268 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CSF3P09919 207 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ZNF250P15622 560 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CD9P21926 228 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CFL1P23528 166 aaKnown RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 MYL9P24844 172 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CAMLGP49069 296 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 TPI1P60174 286 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ERVPABLB-1P60509 514 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 RPL27P61353 136 aaKnown RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 OSTNP61366 133 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CYCSP99999 105 aaKnown RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 HOXC5Q00444 222 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 SP4Q02446 784 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 RIPPLY1Q0D2K3 151 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 TTLL9Q3SXZ7 439 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 SPANXN2Q5MJ10 180 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 CELF3Q5SZQ8 465 aaKnown RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 DCAF12Q5T6F0 453 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 RNLSQ5VYX0 342 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 LIPJQ5W064 366 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 SAXO2Q658L1 398 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 OR2T5Q6IEZ7 315 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ALKAL1Q6UXT8 129 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 GDPGP1Q6ZNW5 385 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 AHSA2Q719I0 299 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 GALNT10Q86SR1 603 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 C17orf64Q86WR6 236 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ZDHHC21Q8IVQ6 265 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 KDM8Q8N371 416 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ZNF614Q8N883 585 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ZNF557Q8N988 423 aaPredicted RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 AQP11Q8NBQ7 271 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 NUP37Q8NFH4 326 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 OR52H1Q8NGJ2 320 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 OR6M1Q8NGM8 313 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 OR2T29Q8NH02 315 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 OR10A6Q8NH74 314 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 LRRC20Q8TCA0 184 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 ZNF675Q8TD23 568 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 MRPL24Q96A35 216 aaKnown RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 RPRD1AQ96P16 312 aaPredicted RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 OPALINQ96PE5 141 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 TRNT1Q96Q11 434 aaKnown RBP4.25□□□□□ -1.73
RFC4-204ENST00000417876 PSKH2Q96QS6 385 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 COPS4Q9BT78 406 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 PINK1Q9BXM7 581 aa4.25□□□□□ -1.73
RFC4-204ENST00000417876 DUSP16Q9BY84 665 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms