RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 TRAV20A0A0B4J274 112 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 BLOC1S5-TXNDC5H3BN57 136 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 PTHP01270 115 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 IGHG1P01857 330 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 F13BP05160 661 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 MMP7P09237 267 aaPredicted RBP12.64□□□□□ -0.39
RPS28-201ENST00000417088 UMPSP11172 480 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 CFPP27918 469 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 PCGF2P35227 344 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 CRYBB2P43320 205 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 RAD52P43351 418 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 CRYBA2P53672 197 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 CLRN1P58418 232 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 MVKQ03426 396 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 TBC1D28Q2M2D7 210 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 PCGF3Q3KNV8 242 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 SLC36A2Q495M3 483 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 MMEL1Q495T6 779 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 FAHD2BQ6P2I3 314 aaPredicted RBP12.64□□□□□ -0.39
RPS28-201ENST00000417088 THSD4Q6ZMP0 1018 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 C1orf229Q6ZS94 237 aaPredicted RBP12.64□□□□□ -0.39
RPS28-201ENST00000417088 NANOGNBQ7Z5D8 188 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 SLC30A8Q8IWU4 369 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
RPS28-201ENST00000417088 NOXO1Q8NFA2 376 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 OR1J2Q8NGS2 313 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 FAHD2AQ96GK7 314 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 SEPHS2Q99611 448 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 ZNF665Q9H7R5 613 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 G6PC2Q9NQR9 355 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
RPS28-201ENST00000417088 IGHV1-69-2A0A0G2JMI3 117 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 IQCMA0A1B0GVH7 501 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 ANGPT2O15123 496 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 TRMUO75648 421 aaKnown RBP12.63□□□□□ -0.39
RPS28-201ENST00000417088 RGS9O75916 674 aaPredicted RBP12.63□□□□□ -0.39
RPS28-201ENST00000417088 AVPP01185 164 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 GZMMP51124 257 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 ZNF84P51523 738 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 UGT2B15P54855 530 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 PLP2Q04941 152 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 RPL18Q07020 188 aaKnown RBP12.63□□□□□ -0.39
RPS28-201ENST00000417088 NFYCQ13952 458 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 AVPI1Q5T686 147 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 SYT14Q8NB59 555 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 SLC26A7Q8TE54 656 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
RPS28-201ENST00000417088 SNX33Q8WV41 574 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 STON2Q8WXE9 905 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 GTF3AQ92664 365 aaKnown RBP12.63□□□□□ -0.39
RPS28-201ENST00000417088 THOC1Q96FV9 657 aaKnown RBP12.63□□□□□ -0.39
RPS28-201ENST00000417088 BCL2L14Q9BZR8 327 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
RPS28-201ENST00000417088 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 A0A1W2PRG6 482 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 PLPP2O43688 288 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 DEAF1O75398 565 aaPredicted RBP12.62□□□□□ -0.39
RPS28-201ENST00000417088 OR7A10O76100 309 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 PNPP00491 289 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 MT-ND1P03886 318 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 ANPEPP15144 967 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 ACADSP16219 412 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 FUT1P19526 365 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
RPS28-201ENST00000417088 SCGB2A2Q13296 93 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 VMACQ2NL98 169 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 INTS11Q5TA45 600 aaKnown RBP12.62□□□□□ -0.39
RPS28-201ENST00000417088 USP51Q70EK9 711 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 NKAIN4Q8IVV8 208 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
RPS28-201ENST00000417088 PFN4Q8NHR9 129 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 ASB10Q8WXI3 467 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 ATP6V1G3Q96LB4 118 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 NANOGQ9H9S0 305 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 INIPQ9NRY2 104 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 CACNG2Q9Y698 323 aa12.62□□□□□ -0.39
RPS28-201ENST00000417088 LOC105371242A0A075B767 164 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 MCIDASD6RGH6 385 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 MGRN1O60291 552 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 MPZL1O95297 269 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 SLC2A10O95528 541 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 EPHA1P21709 976 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 CDAP32320 146 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 APLNRP35414 380 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 AQP2P41181 271 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 MRPS34P82930 218 aaKnown RBP12.61□□□□□ -0.39
RPS28-201ENST00000417088 TEKQ02763 1124 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 HSF2Q03933 536 aa12.61□□□□□ -0.39
RPS28-201ENST00000417088 GLO1Q04760 184 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms