RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CTSFQ9UBX1 484 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 STEAP1Q9UHE8 339 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 SHPKQ9UHJ6 478 aa8.98□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM218A2RU14 115 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 AQP8O94778 261 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 AKR1C4P17516 323 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 PRMT2P55345 433 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 PPIAP62937 165 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 RUNX2Q13950 521 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 EIF2B1Q14232 305 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 Q499Y3 187 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 FAM209BQ5JX69 171 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 C3orf33Q6P1S2 294 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 SVBPQ8N300 66 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ZSCAN1Q8NBB4 408 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 LRRC3BQ96PB8 259 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ELF4Q99607 663 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 BIN3Q9NQY0 253 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CGGBP1Q9UFW8 167 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 DCTN6O00399 190 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CT62P0C5K7 136 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 UBBP0CG47 229 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 UBCP0CG48 685 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CSF2RBP32927 897 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 P2RY2P41231 377 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 RPS27AP62979 156 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 UBA52P62987 128 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 TDGQ13569 410 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 IL10RAQ13651 578 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 FAM53BQ14153 422 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 PAN3Q58A45 887 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 LY6G6FQ5SQ64 297 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 PLPP4Q5VZY2 271 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 RPL13AP3Q6NVV1 102 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 KIRREL2Q6UWL6 708 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ETV3LQ6ZN32 361 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ERN2Q76MJ5 926 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 FOXRED2Q8IWF2 684 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC35F3Q8IY50 421 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 SYS1Q8N2H4 156 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 LCN9Q8WX39 176 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 INSL6Q9Y581 213 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 F5P12259 2224 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 SULT1B1O43704 296 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 FGF17O60258 216 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CTAG2O75638 210 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 LYPD3O95274 346 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ACTL6AO96019 429 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 APOC1P02654 83 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 RHOP08100 348 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ACRP10323 421 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 RPA2P15927 270 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ADCYAP1P18509 176 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CALCRP30988 508 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 TLX1P31314 330 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 HSD17B2P37059 387 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 CDKN2AP42771 156 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ARFIP1P53367 373 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 NR0B2Q15466 257 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 ZIC1Q15915 447 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 C2orf76Q3KRA6 126 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 GLT8D1Q68CQ7 371 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 JMJD6Q6NYC1 403 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 GRASPQ7Z6J2 395 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 BIVMQ86UB2 503 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM200AQ86VY9 491 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 GABRG1Q8N1C3 465 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 INO80EQ8NBZ0 244 aaPredicted RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 OR6N1Q8NGY5 312 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 KLHDC7BQ96G42 594 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 NIT2Q9NQR4 276 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 NDRG3Q9UGV2 375 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 LAMP5Q9UJQ1 280 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 SLC22A13Q9Y226 551 aa8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 MRPS2Q9Y399 296 aaKnown RBP8.97□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3DA0A087WVF3 549 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3IA0A087WXS9 549 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 CPED1A4D0V7 1026 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3LB9A6J9 549 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 XRCC3O43542 346 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 GPRIN2O60269 458 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 ITGA5P08648 1049 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 CSF1P09603 554 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3HP0C7X1 549 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 PVRP15151 417 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 PRKXP51817 358 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 DHRS2Q13268 280 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TGIF1Q15583 401 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 NKAIN2Q5VXU1 208 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3CQ6IPX1 549 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 CCDC36Q8IYA8 594 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TBC1D3Q8IZP1 549 aaPredicted RBP8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 NPEPL1Q8NDH3 523 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 TMEM52Q8NDY8 209 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 OR5T2Q8NGG2 359 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 RXFP4Q8TDU9 374 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 SELENOIQ9C0D9 397 aa8.96□□□□□ -0.97
PTCHD4-202ENST00000398738 ZNF350Q9GZX5 532 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms