RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 A6NHS1 94 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 OR6C76A6NM76 312 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 LYPD4Q6UWN0 246 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 OR10K1Q8NGX5 313 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 CA5BP1Q8WTZ4 195 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 STACQ99469 402 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 TNFRSF19Q9NS68 423 aa10.41□□□□□ -0.74
TTC28-201ENST00000397906 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 CTGFP29279 349 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 NKX6-1P78426 367 aaPredicted RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 ARL16Q0P5N6 197 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 USP51Q70EK9 711 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 PLPP6Q8IY26 295 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 SEMA6DQ8NFY4 1073 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 RBMXL1Q96E39 390 aaKnown RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 ASH2LQ9UBL3 628 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 ZNF169Q14929 603 aaPredicted RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 GLYATL3Q5SZD4 288 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 SLC35G3Q8N808 338 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 CCDC187A0A096LP49 1063 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 DPTQ07507 201 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 FGFBP1Q14512 234 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 FAM109BQ6ICB4 259 aaPredicted RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 ABHD6Q9BV23 337 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 GLULP15104 373 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 NPBWR1P48145 328 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 ANKRD34AQ69YU3 496 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 COMMD7Q86VX2 200 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 GIMAP1Q8WWP7 306 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 FBXO17Q96EF6 278 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 Q96M85 177 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 F8W036 122 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 CRYAAP02489 173 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 GRB2P62993 217 aaKnown RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 BLOC1S1P78537 153 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 IDO2Q6ZQW0 420 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 NIPSNAP1Q9BPW8 284 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 PPA2Q9H2U2 334 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 PHF1O43189 567 aaPredicted RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 FAM71E1Q6IPT2 247 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 Q6ZSR9 355 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 CHST11Q9NPF2 352 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 PRELID3BQ9Y3B1 194 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 OR2B11Q5JQS5 317 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 SLC22A24Q8N4F4 322 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 ZNF454Q8N9F8 522 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 KCNJ15Q99712 375 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 SLC38A1Q9H2H9 487 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 FBXO7Q9Y3I1 522 aa10.4□□□□□ -0.74
TTC28-201ENST00000397906 MYH14Q7Z406 1995 aaKnown RBP10.4□□□□□ -0.74
TTC28-201ENST00000397906 NSA2O95478 260 aaKnown RBP10.4□□□□□ -0.75
TTC28-201ENST00000397906 CD14P08571 375 aa10.4□□□□□ -0.75
TTC28-201ENST00000397906 CD22P20273 847 aa10.4□□□□□ -0.75
TTC28-201ENST00000397906 CGB2Q6NT52 195 aa10.4□□□□□ -0.75
TTC28-201ENST00000397906 RPS10P5Q9NQ39 176 aa10.4□□□□□ -0.75
TTC28-201ENST00000397906 HACD4Q5VWC8 232 aa10.4□□□□□ -0.75
TTC28-201ENST00000397906 OR7G2Q8NG99 324 aa10.4□□□□□ -0.75
TTC28-201ENST00000397906 FBXO24O75426 580 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 SCAF4O95104 1147 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 ZNF728P0DKX0 622 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 RNF32Q9H0A6 362 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 CGGBP1Q9UFW8 167 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 RPL27P61353 136 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 MFGE8Q08431 387 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 ALKBH1Q13686 389 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 Q499Y3 187 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 YOD1Q5VVQ6 348 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 KCNG3Q8TAE7 436 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 ANKRD61A6NGH8 418 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 UPK1BO75841 260 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR1C1Q15619 314 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TRIP6Q15654 476 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 CMIPQ8IY22 773 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 CA13Q8N1Q1 262 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 LINC01465Q8N7H1 131 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR2T27Q8NH04 317 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR10J5Q8NHC4 309 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TEX37Q96LM6 180 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 A3GALT2U3KPV4 340 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 GON4LQ3T8J9 2241 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR2T7P0C7T2 308 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 GLRA1P23415 457 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TRHRP34981 398 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 MLLT11Q13015 90 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 DMRTC1Q5HYR2 192 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TMEM30AQ9NV96 361 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 HABP2Q14520 560 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 DESI1Q6ICB0 168 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.39□□□□□ -0.752e-6■■■■□ 25.7
TTC28-201ENST00000397906 SLC22A11Q9NSA0 550 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TCRBV3S1A0A5B6 114 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 GPR137BO60478 399 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 ARHGAP11BQ3KRB8 267 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 NXNL2Q5VZ03 156 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 INTS12Q96CB8 462 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 UNKLQ9H9P5 680 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 GLIPR1L1Q6UWM5 242 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms