RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 FAM171A2A8MVW0 826 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 C3orf80F5H4A9 247 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 H7C417 338 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 CDC42EP2O14613 210 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 KRT36O76013 467 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 DIRAS1O95057 198 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 NDUFB2O95178 105 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 PTHP01270 115 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 MSX2P35548 267 aaPredicted RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 RPL4P36578 427 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 ACVR1BP36896 505 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 OMPP47874 163 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 PTDSS1P48651 473 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 SNRPD2P62316 118 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 RAB1AP62820 205 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 TRIM25Q14258 630 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 DNAL1Q4LDG9 190 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 GPR139Q6DWJ6 353 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 TBPL2Q6SJ96 375 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 SLC16A14Q7RTX9 510 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 BIVMQ86UB2 503 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 DHFR2Q86XF0 187 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 ZDHHC21Q8IVQ6 265 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 LINC00471Q8N535 108 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 ARIH2OSQ8N7S6 290 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 SYT14Q8NB59 555 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 ZNF519Q8TB69 540 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 FAM46AQ96IP4 442 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 RSRC1Q96IZ7 334 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 TSPAN32Q96QS1 320 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 KCNN2Q9H2S1 579 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 MAGIXQ9H6Y5 334 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 ZNF224Q9NZL3 707 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 GRHPRQ9UBQ7 328 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 ZNF346Q9UL40 294 aaKnown RBP11□□□□□ -0.65
GGPS1-203ENST00000391855 TMCC3Q9ULS5 477 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 SIGLEC7Q9Y286 467 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 SPEF1Q9Y4P9 236 aa11□□□□□ -0.65
GGPS1-203ENST00000391855 HEATR1Q9H583 2144 aaKnown RBP10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ARID1AO14497 2285 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 SH3PXD2BA1X283 911 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 B9A039 149 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 XKRYO14609 159 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 SERPINA5P05154 406 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 CELA3BP08861 270 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 T-ENOLP0DO92 83 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ZNF14P17017 642 aaPredicted RBP10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ATP6V1B2P21281 511 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 CALCRP30988 508 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 GUCA1AP43080 201 aaPredicted RBP10.99□□□□□ -0.65
GGPS1-203ENST00000391855 MAGEA2P43356 314 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 GIPRP48546 466 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 RPS23P62266 143 aaKnown RBP10.99□□□□□ -0.65
GGPS1-203ENST00000391855 FHL1Q13642 323 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 EFNB3Q15768 340 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 SLC25A47Q6Q0C1 308 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 RINLQ6ZS11 566 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 IGFN1Q86VF2 1251 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 SKA3Q8IX90 412 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 OR52J3Q8NH60 311 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ASB9Q96DX5 294 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 COX4I2Q96KJ9 171 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ZNF75AQ96N20 296 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ZNF570Q96NI8 536 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 FUZQ9BT04 418 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 TRIM15Q9C019 465 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 SEC61A2Q9H9S3 476 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 SIAEQ9HAT2 523 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 NOX3Q9HBY0 568 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 TAS2R1Q9NYW7 299 aa10.99□□□□□ -0.65
GGPS1-203ENST00000391855 ALPK2Q86TB3 2170 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 PLCE1Q9P212 2302 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 UNC119BA6NIH7 251 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 SLC2A10O95528 541 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 IGHV4-39P01824 125 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 INHBBP09529 407 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 APEHP13798 732 aaKnown RBP10.98□□□□□ -0.65
GGPS1-203ENST00000391855 HOXB6P17509 224 aaKnown RBP10.98□□□□□ -0.65
GGPS1-203ENST00000391855 FPR3P25089 353 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 SDHAP31040 664 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 RRM2P31350 389 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 SERPINF1P36955 418 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 MYBPC1Q00872 1141 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 GALK2Q01415 458 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 PLP2Q04941 152 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 PIGFQ07326 219 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 SNTB2Q13425 540 aaKnown RBP10.98□□□□□ -0.65
GGPS1-203ENST00000391855 DAG1Q14118 895 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 GK3PQ14409 553 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 SEC23BQ15437 767 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 CLEC12BQ2HXU8 276 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 CYP2R1Q6VVX0 501 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 FOXL2NBQ6ZUU3 175 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 FAM122BQ7Z309 247 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 ADCK1Q86TW2 530 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 MYPOPQ86VE0 399 aaPredicted RBP10.98□□□□□ -0.65
GGPS1-203ENST00000391855 MEX3DQ86XN8 651 aaKnown RBP10.98□□□□□ -0.65
GGPS1-203ENST00000391855 OR1J2Q8NGS2 313 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 LRGUKQ96M69 825 aa10.98□□□□□ -0.65
GGPS1-203ENST00000391855 WACQ9BTA9 647 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms