RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 HIST3H2AQ7L7L0 130 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 KIRREL3Q8IZU9 778 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 C17orf78Q8N4C9 275 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 BHLHE23Q8NDY6 225 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 C1orf162Q8NEQ5 155 aaPredicted RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 SLC30A7Q8NEW0 376 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 OR2T12Q8NG77 320 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 TMEM239Q8WW34 195 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 HDAC2Q92769 488 aaKnown RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 HIST1H2ACQ93077 130 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 YIPF5Q969M3 257 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 ARHGDIGQ99819 225 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 OR2J1Q9GZK6 312 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 DENND2DQ9H6A0 471 aaPredicted RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 REV1Q9UBZ9 1251 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 TRIM33Q9UPN9 1127 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 SOX21Q9Y651 276 aaPredicted RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 WNK1Q9H4A3 2382 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 LOC100509620A0A075B734 347 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 IGHV3OR16-10A0A075B7F0 116 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 A0A1W2PPL8 197 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 M0R233 179 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 NME4O00746 187 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 DBHP09172 617 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 ZNF32P17041 273 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 SRD5A1P18405 259 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 ANOS1P23352 680 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 KDELR2P33947 212 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 MAP2K6P52564 334 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 PABPC1L2AQ5JQF8 200 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 ELFN2Q5R3F8 820 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 CYB5R2Q6BCY4 276 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 ZNF774Q6NX45 483 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 CORO6Q6QEF8 472 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 MSANTD1Q6ZTZ1 278 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 ABHD12BQ7Z5M8 362 aaPredicted RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 DPP10Q8N608 796 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 RASD2Q96D21 266 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 SLC25A44Q96H78 314 aaPredicted RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 FAM46AQ96IP4 442 aaKnown RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 DCLRE1CQ96SD1 692 aaKnown RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 ELAC2Q9BQ52 826 aaKnown RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 PIMREGQ9BSJ6 248 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 KATNB1Q9BVA0 655 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 TMEM38BQ9NVV0 291 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 THUMPD1Q9NXG2 353 aaKnown RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 MRPL39Q9NYK5 338 aaKnown RBP4□□□□□ -1.77
C9orf72-203ENST00000380003 TAS2R1Q9NYW7 299 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 TAAR3PQ9P1P4 343 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 N6AMT1Q9Y5N5 214 aa4□□□□□ -1.77
C9orf72-203ENST00000380003 LOC105371242A0A075B767 164 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 LOC390937A0A1W2PQ73 354 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 ISPDA4D126 451 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 PRORSD1PA6NEY8 169 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 B9A039 149 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 DHHO43323 396 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 TRMUO75648 421 aaKnown RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 SERPINA1P01009 418 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 ARR3P36575 388 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 WNT5AP41221 380 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 CENPAP49450 140 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 VLDLRP98155 873 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 LIPEQ05469 1076 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 CYLC2Q14093 348 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 HLXQ14774 488 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 KRTAP21-3Q3LHN1 58 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 DMRTC1Q5HYR2 192 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 TMEM154Q6P9G4 183 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 SMARCD3Q6STE5 483 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 LYPD4Q6UWN0 246 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 C6orf89Q6UWU4 347 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 SLC15A3Q8IY34 581 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 OR5AS1Q8N127 324 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 OR1J1Q8NGS3 322 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 BPIFA2Q96DR5 249 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 Q96M85 177 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 EPYCQ99645 322 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 GPA33Q99795 319 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 RAB1BQ9H0U4 201 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 PCDHAC1Q9H158 963 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 POFUT1Q9H488 388 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 METTL17Q9H7H0 456 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 ZNF275Q9NSD4 429 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 MAN2C1Q9NTJ4 1040 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 ARGLU1Q9NWB6 273 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 HIF1ANQ9NWT6 349 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 A4GNTQ9UNA3 340 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 CMAHPQ9Y471 501 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 RPL36A-HNRNPH2H7BZ11 118 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 DCTN6O00399 190 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 STAMBPO95630 424 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 SERPINA5P05154 406 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 PCGF2P35227 344 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 RPL4P36578 427 aaKnown RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 PDLIM4P50479 330 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 CTXN1P60606 82 aa3.99□□□□□ -1.77
C9orf72-203ENST00000380003 SEC61A1P61619 476 aaKnown RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 PRB3Q04118 309 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 LOXL1Q08397 574 aaPredicted RBP3.99□□□□□ -1.77
C9orf72-203ENST00000380003 POU4F2Q12837 409 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms