RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ZNF782Q6ZMW2 699 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 MISPQ8IVT2 679 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SLC22A8Q8TCC7 542 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 AKAP1Q92667 903 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 RFT1Q96AA3 541 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 MAP6Q96JE9 813 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 OR8D2Q9GZM6 311 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 TRBV11-1A0A0K0K1C0 115 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR23D1E9PI22 279 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 IMPA2O14732 288 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 FZD7O75084 574 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PPP1R3DO95685 299 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ABHD16AO95870 558 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR23D2P0DMB1 279 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SULT1A3P0DMM9 295 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SULT1A4P0DMN0 295 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 MST1P26927 711 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 DPP4P27487 766 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 GABRA3P34903 492 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 MNDAP41218 407 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SRP9P49458 86 aaKnown RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ACTC1P68032 377 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ACTA1P68133 377 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 GSG1Q2KHT4 349 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 CCDC58Q4VC31 144 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 HSD17B12Q53GQ0 312 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 DCAF10Q5QP82 559 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 IDNKQ5T6J7 187 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PYHIN1Q6K0P9 492 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SHISA6Q6ZSJ9 500 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 OR4N2Q8NGD1 307 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 GRPEL2Q8TAA5 225 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 TRMT10AQ8TBZ6 339 aaKnown RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 NXF5Q9H1B4 397 aaKnown RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 EMC7Q9NPA0 242 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SLC23A1Q9UHI7 598 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ADAM30Q9UKF2 790 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 CUL9Q8IWT3 2517 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 A0A087WV48 116 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 DAPL1A0PJW8 107 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 MCIDASD6RGH6 385 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 AGRPO00253 132 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ORC5O43913 435 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRKNO60260 465 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 UBL3O95164 117 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SAGP10523 405 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 HIST1H1CP16403 213 aaKnown RBP6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ATP12AP54707 1039 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 TMEM255AQ5JRV8 349 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 C19orf18Q8NEA5 215 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ANGPTL6Q8NI99 470 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 KCNE4Q8WWG9 221 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PSMF1Q92530 271 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 GHSRQ92847 366 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 TNFRSF13CQ96RJ3 184 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 NRIP3Q9NQ35 241 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 IL17BQ9UHF5 180 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SPEGQ15772 3267 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 INMT-MINDY4F8WBC2 141 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 TLX3O43711 291 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FADS1O60427 444 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ABCD3P28288 659 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 EIF2S3P41091 472 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 RPS18P62269 152 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DHODHQ02127 395 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ACSM3Q53FZ2 586 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 HLA-DQA1Q5Y7H0 255 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ARHGAP11AQ6P4F7 1023 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 POMGNT2Q8NAT1 580 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 OR52L1Q8NGH7 329 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DOK4Q8TEW6 326 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 C8orf44Q96CB5 159 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 TBX5Q99593 518 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ZNF160Q9HCG1 818 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DDX28Q9NUL7 540 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ABRACLQ9P1F3 81 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 MED31Q9Y3C7 131 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 A0A087WUJ7 227 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 A0A0B4J203 849 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 IGHV3-20A0A0C4DH32 117 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 NOTOA8MTQ0 251 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ALG1L2C9J202 215 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ETV2O00321 342 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ARPC3O15145 178 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 MRPL3P09001 348 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 OR2T7P0C7T2 308 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 CXCL3P19876 107 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ADH6P28332 368 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 HCCSP53701 268 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 UCNP55089 124 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 NANOS3P60323 173 aaKnown RBP6.94□□□□□ -1.3
CDKL5-202ENST00000379996 DGCR2P98153 550 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FCN2Q15485 313 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 CD276Q5ZPR3 534 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 CEACAM19Q7Z692 300 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ZNF440Q8IYI8 595 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 PRSS58Q8IYP2 241 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 FAM109AQ8N4B1 249 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 SAMD12Q8N8I0 201 aa6.94□□□□□ -1.3
CDKL5-202ENST00000379996 ZNF527Q8NB42 609 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms