RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ZNF74Q16587 644 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 ARHGAP40Q5TG30 622 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 TANGO2Q6ICL3 276 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 C10orf53Q8N6V4 93 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 RCBTB1Q8NDN9 531 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 C4orf45Q96LM5 186 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 DCBLD2Q96PD2 775 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 MNTQ99583 582 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 MYOZ1Q9NP98 299 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-202ENST00000375299 SLC17A2O00624 439 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 GP1BAP07359 652 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 FBXO45P0C2W1 286 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 PVRP15151 417 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 MYOGP15173 224 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 ALOX5APP20292 161 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 SRSF4Q08170 494 aaKnown RBP19.15■□□□□ 0.66
UPF3A-202ENST00000375299 CCDC36Q8IYA8 594 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 CCL4L1Q8NHW4 92 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 OR1E3Q8WZA6 343 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 SLC25A28Q96A46 364 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 NARS2Q96I59 477 aaKnown RBP19.15■□□□□ 0.66
UPF3A-202ENST00000375299 SFXN1Q9H9B4 322 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 LRIT1Q9P2V4 623 aa19.15■□□□□ 0.66
UPF3A-202ENST00000375299 ELOA3DA6NLF2 546 aaPredicted RBP19.14■□□□□ 0.66
UPF3A-202ENST00000375299 H7C1C5 153 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 SULT1C2O00338 296 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 SLC31A1O15431 190 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 SLC25A4P12235 298 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 RPS27P42677 84 aaKnown RBP19.14■□□□□ 0.66
UPF3A-202ENST00000375299 LCN6P62502 163 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 RUNX3Q13761 415 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 TOMM20Q15388 145 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 ELOA3BQ3SY89 546 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 WDR38Q5JTN6 314 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM205Q6UW68 189 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 DPY19L4Q7Z388 723 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 OR2W3Q7Z3T1 314 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 RD3Q7Z3Z2 195 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM185AQ8NFB2 350 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 ELOA3Q8NG57 546 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 OR1J2Q8NGS2 313 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 THRSPQ92748 146 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 PHYHIPLQ96FC7 376 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 SPACA7Q96KW9 195 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 ZNF75AQ96N20 296 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 MOGAT1Q96PD6 335 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 VRK1Q99986 396 aaPredicted RBP19.14■□□□□ 0.66
UPF3A-202ENST00000375299 G6PC3Q9BUM1 346 aa19.14■□□□□ 0.66
UPF3A-202ENST00000375299 HSPB2A8KAH6 182 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 TXNDC12O95881 172 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 HSPB2Q16082 182 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 C11orf87Q6NUJ2 197 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 LPCAT3Q6P1A2 487 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 RNF44Q7L0R7 432 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 GALNT16Q8N428 558 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 PIGMQ9H3S5 423 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 KCNK7Q9Y2U2 307 aa19.14■□□□□ 0.65
UPF3A-202ENST00000375299 KIAA0100Q14667 2235 aaKnown RBP19.14■□□□□ 0.65
UPF3A-202ENST00000375299 HRKO00198 91 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 PLRG1O43660 514 aaKnown RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 F13BP05160 661 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ACTR1BP42025 376 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ACTR1AP61163 376 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 PPIAP62937 165 aaKnown RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 NNATQ16517 81 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 MESTQ5EB52 335 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ENPP7Q6UWV6 458 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 LIPHQ8WWY8 451 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 SEH1LQ96EE3 360 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ZNF471Q9BX82 626 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 TINAGL1Q9GZM7 467 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 Q9N2J8 555 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 COMMD9Q9P000 198 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 TMEM14AQ9Y6G1 99 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 M0QYG6 137 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 RDH16O75452 317 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 AMY2AP04746 511 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 H2AFB1P0C5Y9 115 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 CD34P28906 385 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 CCKBRP32239 447 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 NR0B2Q15466 257 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ATPAF1Q5TC12 328 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ZNF776Q68DI1 518 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 FAM166AQ6J272 317 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 UQCC3Q6UW78 93 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 CSNK1A1LQ8N752 337 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 OR4C3Q8NH37 302 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 CCNL2Q96S94 520 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-202ENST00000375299 GRHPRQ9UBQ7 328 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 NDRG3Q9UGV2 375 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 FBXO4Q9UKT5 387 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 PCOLCE2Q9UKZ9 415 aa19.13■□□□□ 0.65
UPF3A-202ENST00000375299 ATG12O94817 140 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 LSSP48449 732 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 DHRS2Q13268 280 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 CCDC157Q569K6 752 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 LRRC69Q6ZNQ3 347 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 BAHD1Q8TBE0 780 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-202ENST00000375299 TSPAN32Q96QS1 320 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 INTS14Q96SY0 518 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms