RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ACHEP22303 614 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 NAA10P41227 235 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 CASP3P42574 277 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 RFX2P48378 723 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 GSK3AP49840 483 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SSR4P51571 173 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 CLDN20P56880 219 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 HSF1Q00613 529 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 DMWDQ09019 674 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SSPNQ14714 243 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PCOLCEQ15113 449 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 STK11Q15831 433 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PLPPR5Q32ZL2 321 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 CEP78Q5JTW2 689 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 GLT8D1Q68CQ7 371 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 FCRLBQ6BAA4 426 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 RAB12Q6IQ22 244 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 LYPD8Q6UX82 237 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC35D2Q76EJ3 337 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 DPY19L4Q7Z388 723 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 KRT77Q7Z794 578 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF227Q86WZ6 799 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 UEVLDQ8IX04 471 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PRR22Q8IZ63 422 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 TCTE3Q8IZS6 198 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 GTPBP8Q8N3Z3 284 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM109AQ8N4B1 249 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 TOMM5Q8N4H5 51 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 DTWD2Q8NBA8 298 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC38A9Q8NBW4 561 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 OR4K17Q8NGC6 315 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 OR6N2Q8NGY6 317 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 OR52N5Q8NH56 324 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 MAFAQ8NHW3 353 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PAQR8Q8TEZ7 354 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SMIM4Q8WVI0 70 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 KCNE4Q8WWG9 221 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 ASB10Q8WXI3 467 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PNPLA2Q96AD5 504 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PHF21AQ96BD5 680 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC25A36Q96CQ1 311 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 HAVCR1Q96D42 359 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC25A44Q96H78 314 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 TMEM41AQ96HV5 264 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 MAP6Q96JE9 813 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 C4orf45Q96LM5 186 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 LMF1Q96S06 567 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 RASL10BQ96S79 203 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 CDC6Q99741 560 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 SF3B5Q9BWJ5 86 aaKnown RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 NOX4Q9NPH5 578 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 DIABLOQ9NR28 239 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 C14orf119Q9NWQ9 140 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 STMN3Q9NZ72 180 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 FRRS1LQ9P0K9 344 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 MRM2Q9UI43 246 aaKnown RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 FBXL4Q9UKA2 621 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 IKZF2Q9UKS7 526 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PADI1Q9ULC6 663 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 ATXN7L1Q9ULK2 861 aaPredicted RBP7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 PCDHGA1Q9Y5H4 931 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 CDH23Q9H251 3354 aa7.84□□□□□ -1.15
SNRNP40-202ENST00000373720 ADAMTS20P59510 1910 aa7.84□□□□□ -1.16
SNRNP40-202ENST00000373720 EML5Q05BV3 1969 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 TP53BP1Q12888 1972 aaPredicted RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 C5orf42Q9H799 3197 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 NSG1A0A0A6YYJ2 146 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ZC3H12DA2A288 527 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 CDC14CA4D256 554 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 FAM172BPA6NC97 362 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ANXA2P2A6NMY6 339 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 C21orf140B9A014 251 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 MS4A18H0YCH9 400 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ACOT7O00154 380 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 PLA2G10O15496 165 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 HLA-DQA2P01906 255 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ANXA2P07355 339 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ERP29P30040 261 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF133P52736 654 aaPredicted RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 LSM6P62312 80 aaKnown RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ADAM8P78325 824 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 MS4A18Q3C1V0 323 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ELFN2Q5R3F8 820 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF57Q68EA5 555 aaPredicted RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 H3F3CQ6NXT2 135 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 KLHL24Q6TFL4 600 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 STAC2Q6ZMT1 411 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 DNM1P46Q6ZS02 220 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 SSX6Q7RTT6 188 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 PM20D2Q8IYS1 436 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 OR2M3Q8NG83 312 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 OR10H5Q8NGA6 315 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 OR56B4Q8NH76 319 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 THEM6Q8WUY1 208 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 FCAMRQ8WWV6 532 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 C8orf44Q96CB5 159 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 C10orf35Q96D05 121 aa7.83□□□□□ -1.16
SNRNP40-202ENST00000373720 LIN37Q96GY3 246 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms