RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 FAM46AQ96IP4 442 aaKnown RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 TRAF4Q9BUZ4 470 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM181Q9P2C4 612 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SLC6A5Q9Y345 797 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 TSPAN11A1L157 253 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MBLAC1A4D2B0 266 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 HOXC11O43248 304 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PPIHO43447 177 aaKnown RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 HIST1H1TP22492 207 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 LAP3P28838 519 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 BRS3P32247 399 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SNCAP37840 140 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TSPAN7P41732 249 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 CX3CR1P49238 355 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SRP9P49458 86 aaKnown RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SORDQ00796 357 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 GPR19Q15760 415 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 HFEQ30201 348 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 GLYR1Q49A26 553 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 THNSL2Q86YJ6 484 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 CDRT4Q8N9R6 151 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 OR10W1Q8NGF6 305 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 OR5AK3PQ8NH89 298 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SCAMP4Q969E2 229 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM18Q96B42 140 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PCDHA9Q9Y5H5 950 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MTCH2Q9Y6C9 303 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 H3BMQ9 156 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PRSS3P35030 304 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 GMPRP36959 345 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ATP4BP51164 291 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 CYP1B1Q16678 543 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 KRTCAP3Q53RY4 240 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 BLOC1S3Q6QNY0 202 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 GALNT10Q86SR1 603 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 CADM3Q8N126 398 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ACBD7Q8N6N7 88 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MCHR2Q969V1 340 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PHYHIPLQ96FC7 376 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 DPH1Q9BZG8 443 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ADAMTS6Q9UKP5 1117 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PLAGL1Q9UM63 463 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TRBV2A0A0J9YWF9 115 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 FAAHO00519 579 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 CSF1P09603 554 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 GAAP10253 952 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TGM1P22735 817 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MYF6P23409 242 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TACR3P29371 465 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MTNR1AP48039 350 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SPINT3P49223 89 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PKIAP61925 76 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 UFM1P61960 85 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MGAT3Q09327 533 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 FCN2Q15485 313 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 IQCJQ1A5X6 159 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 OXLD1Q5BKU9 147 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 C18orf63Q68DL7 685 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ZDHHC24Q6UX98 284 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF679Q8IYX0 411 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF738Q8NE65 137 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SLC30A7Q8NEW0 376 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 OR2T33Q8NG76 320 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 FAM213BQ8TBF2 198 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 FBXO17Q96EF6 278 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ZDHHC18Q9NUE0 388 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 MYO5AQ9Y4I1 1855 aaKnown RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TRABD2BA6NFA1 517 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM235A6NFC5 223 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 LINC00587B1AMM8 73 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ACOT8O14734 319 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ARPC1BO15143 372 aaKnown RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 IL2RGP31785 369 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SULT1A2P50226 295 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 C17orf67Q0P5P2 114 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 RPS26P11Q5JNZ5 115 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SHEQ5VZ18 495 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SYT14Q8NB59 555 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PTDSS2Q9BVG9 487 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SLC26A1Q9H2B4 701 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 ANKRD19PQ9H560 264 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 PRSS16Q9NQE7 514 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 FBXO8Q9NRD0 319 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 SMOXQ9NWM0 555 aa7.97□□□□□ -1.13
SYNE1-206ENST00000367253 A0A0D9SG52 128 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 PRSS51A0A1B0GVH4 220 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 A0A1W2PPK0 400 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF780AO75290 641 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-206ENST00000367253 OPN1LWP04000 364 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 MRPL3P09001 348 aaKnown RBP7.96□□□□□ -1.13
SYNE1-206ENST00000367253 OR4E1P0C645 316 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 ELAVL4P26378 380 aaKnown RBP7.96□□□□□ -1.13
SYNE1-206ENST00000367253 IZUMO4Q1ZYL8 232 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 IER5LQ5T953 404 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 REEP3Q6NUK4 255 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 VWA1Q6PCB0 445 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 TOMM20LQ6UXN7 152 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 MEX3BQ6ZN04 569 aaKnown RBP7.96□□□□□ -1.13
SYNE1-206ENST00000367253 SHISA6Q6ZSJ9 500 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms