RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ZDHHC22Q8N966 263 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 SMYD1Q8NB12 490 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 HIPK4Q8NE63 616 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 OR1J2Q8NGS2 313 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 SPDL1Q96EA4 605 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 BCL2L14Q9BZR8 327 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 CCDC167Q9P0B6 97 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 GMEB1Q9Y692 573 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 USH1CQ9Y6N9 552 aa17.96■□□□□ 0.47
CD47-202ENST00000361309 TRBV5-3A0A0A0MS03 114 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 FMO6PO60774 539 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 GPX2P18283 190 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 DRD4P21917 467 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 HFEQ30201 348 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 ARHGDIGQ99819 225 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 LRMDAQ9H2I8 198 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 SAP30LQ9HAJ7 183 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 NANSQ9NR45 359 aa17.95■□□□□ 0.46
CD47-202ENST00000361309 IQCMA0A1B0GVH7 501 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 CPSF4LA6NMK7 179 aaKnown RBP17.94■□□□□ 0.46
CD47-202ENST00000361309 MT-ND5P03915 603 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 THY1P04216 161 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 PLP2Q04941 152 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 NPTX1Q15818 432 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 MOGQ16653 247 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 ENTPD8Q5MY95 495 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 TTC33Q6PID6 262 aaPredicted RBP17.94■□□□□ 0.46
CD47-202ENST00000361309 ZNF771Q7L3S4 317 aaPredicted RBP17.94■□□□□ 0.46
CD47-202ENST00000361309 LRRC18Q8N456 261 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 RBM15BQ8NDT2 890 aaKnown RBP17.94■□□□□ 0.46
CD47-202ENST00000361309 OR6T1Q8NGN1 323 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 OR1J1Q8NGS3 322 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 C22orf15Q8WYQ4 148 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 RAB1CQ92928 201 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 TIMD4Q96H15 378 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 C7orf69Q9H7B7 122 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 SLCO1B3Q9NPD5 702 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.94■□□□□ 0.46
CD47-202ENST00000361309 OPN4Q9UHM6 478 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 CORO2BQ9UQ03 480 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 ANGPT4Q9Y264 503 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 PCDHGB1Q9Y5G3 927 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 TGP01266 2768 aa17.94■□□□□ 0.46
CD47-202ENST00000361309 TRRAPQ9Y4A5 3859 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 EVPLLA8MZ36 301 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 KPNA4O00629 521 aaPredicted RBP17.93■□□□□ 0.46
CD47-202ENST00000361309 LYPD3O95274 346 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 IGHV3-13P01766 116 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 IGHG1P01857 330 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 OPN1SWP03999 348 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 HIST1H2ABP04908 130 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 MAKP20794 623 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 GATA3P23771 443 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 ZNF81P51508 661 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 SLC18A1P54219 525 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 CLRN1P58418 232 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 UBA52P62987 128 aaKnown RBP17.93■□□□□ 0.46
CD47-202ENST00000361309 DUSP7Q16829 419 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 HIST3H2AQ7L7L0 130 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 HIST1H2ACQ93077 130 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 MCHR2Q969V1 340 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 ELMOD3Q96FG2 381 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 ZNF347Q96SE7 839 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 GAL3ST1Q99999 423 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 NKIRAS1Q9NYS0 192 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 ZNF229Q9UJW7 825 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 TRIM33Q9UPN9 1127 aa17.93■□□□□ 0.46
CD47-202ENST00000361309 POLR3GO15318 223 aaPredicted RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 SPRY3O43610 288 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 PRSS23O95084 383 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 MMP7P09237 267 aaPredicted RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 CCNOP22674 350 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 APLNRP35414 380 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 ZNF84P51523 738 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 PCBP3P57721 371 aaKnown RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 LCN2P80188 198 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 HIST3H3Q16695 136 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 NRN1LQ496H8 165 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 RBM45Q8IUH3 476 aaKnown RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 CPEB3Q8NE35 698 aaKnown RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 GPR32P1Q8NGA4 272 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 ADAMTS16Q8TE57 1224 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 CCL17Q92583 94 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 CPPED1Q9BRF8 314 aaPredicted RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 DDX28Q9NUL7 540 aaKnown RBP17.92■□□□□ 0.46
CD47-202ENST00000361309 SLC7A7Q9UM01 511 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 PPIAL4AQ9Y536 164 aa17.92■□□□□ 0.46
CD47-202ENST00000361309 TMPRSS2O15393 492 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 FSHBP01225 129 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 IGHV1-46P01743 117 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 ASAH2BP0C7U1 165 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 UMPSP11172 480 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 FPR2P25090 351 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 MAGOHP61326 146 aaKnown RBP17.91■□□□□ 0.46
CD47-202ENST00000361309 HSF2Q03933 536 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 TMEM255AQ5JRV8 349 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 FAM209AQ5JX71 171 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 PRR31Q5SQ13 230 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 SPATA46Q5T0L3 261 aa17.91■□□□□ 0.46
CD47-202ENST00000361309 RETREG3Q86VR2 466 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms