RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 DLX2Q07687 328 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 WDR5BQ86VZ2 330 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 STT3BQ8TCJ2 826 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 IL1F10Q8WWZ1 152 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 WDFY2Q96P53 400 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 NECAP2Q9NVZ3 263 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 EMC9Q9Y3B6 208 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 TSPAN12O95859 305 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 LGI1O95970 557 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 IGHG1P01857 330 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 KLK3P07288 261 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 LTB4RQ15722 352 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 GALNT16Q8N428 558 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 GCDHQ92947 438 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PIGQQ9BRB3 760 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 C1QTNF3Q9BXJ4 246 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PRSS16Q9NQE7 514 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 DUSP22Q9NRW4 184 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 TM7SF3Q9NS93 570 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 LOC102725191A0A1B0GVB3 256 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 SLC16A7O60669 478 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 FABP4P15090 132 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 C5AR1P21730 350 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PRLHRP49683 370 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OR10A3P58181 314 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 SIM1P81133 766 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 LBHQ53QV2 105 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 FAM74A1Q5RGS3 127 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 GDF6Q6KF10 455 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 Q6ZRG5 221 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OR5AR1Q8NGP9 310 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OLIG1Q8TAK6 271 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PARP12Q9H0J9 701 aaKnown RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PHF1O43189 567 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PTBP3O95758 552 aaKnown RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 DOC2BQ14184 412 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OR2AK2Q8NG84 335 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 OR8U1Q8NH10 309 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 NKX3-1Q99801 234 aaPredicted RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 MARVELD1Q9BSK0 173 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 ZMAT3Q9HA38 289 aaKnown RBP8.1□□□□□ -1.11
COL6A6-201ENST00000358511 KMT2EQ8IZD2 1858 aa8.1□□□□□ -1.11
COL6A6-201ENST00000358511 STRCQ7RTU9 1775 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 IQCF3P0C7M6 154 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF28P17035 718 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 MAKP20794 623 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 SLC19A1P41440 591 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ENDOGQ14249 297 aaKnown RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TESK1Q15569 626 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 RHOFQ9HBH0 211 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 CRLF2Q9HC73 371 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 B4GALT7Q9UBV7 327 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 CA12O43570 354 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 DPP4P27487 766 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 SNRPEP62304 92 aaKnown RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 SLC17A1Q14916 467 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 PLCXD3Q63HM9 321 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 B3GNT9Q6UX72 402 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 L3MBTL4Q8NA19 623 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ISG20Q96AZ6 181 aaKnown RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ARV1Q9H2C2 271 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 POMT1Q9Y6A1 747 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TRPM3Q9HCF6 1732 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 A0A087X0M5 115 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 A0A1B0GX30 115 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 DHPSP49366 369 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 BAXQ07812 192 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TTC9Q92623 222 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TVP23CQ96ET8 276 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 LYSMD1Q96S90 227 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 RBM24Q9BX46 236 aaKnown RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 A6NLC8 198 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TEAD1P28347 426 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 NPBWR1P48145 328 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 HNRNPA3P51991 378 aaKnown RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 FABP9Q0Z7S8 132 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 GLDNQ6ZMI3 551 aaPredicted RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 PPP1R3BQ86XI6 285 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 PNPLA1Q8N8W4 532 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 FIBINQ8TAL6 211 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF480Q8WV37 535 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 PEX11GQ96HA9 241 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TACR1P25103 407 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 TSFMP43897 325 aaKnown RBP8.09□□□□□ -1.11
COL6A6-201ENST00000358511 LCN6P62502 163 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 ARHGAP11BQ3KRB8 267 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 GDF7Q7Z4P5 450 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 SELENOIQ9C0D9 397 aa8.09□□□□□ -1.11
COL6A6-201ENST00000358511 OR52A1Q9UKL2 312 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms