RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 KLHL17Q6TDP4 642 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 DPY19L2P2Q6ZN68 376 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 DPPA2Q7Z7J5 298 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZER1Q7Z7L7 766 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ADCK1Q86TW2 530 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 MEX3DQ86XN8 651 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CCDC36Q8IYA8 594 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FAM169BQ8N8A8 192 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 WDR31Q8NA23 367 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR10G2Q8NGC3 310 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR9Q2Q8NGE9 314 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR52L1Q8NGH7 329 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 HDAC2Q92769 488 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 BCL2L2Q92843 193 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 MUCL1Q96DR8 90 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZC3HAV1LQ96H79 300 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TXNDC15Q96J42 360 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 LURAP1Q96LR2 239 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF570Q96NI8 536 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TSPAN32Q96QS1 320 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SNX18Q96RF0 628 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 EMC6Q9BV81 110 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 KATNB1Q9BVA0 655 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 NELFAQ9H3P2 528 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SMURF2Q9HAU4 748 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ARMC1Q9NVT9 282 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 DNAJB9Q9UBS3 223 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FBXL3Q9UKT7 428 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SPTBN1Q01082 2364 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 M0R3G1 203 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 GNGT2O14610 69 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 DHHO43323 396 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 MGRN1O60291 552 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 PRF1P14222 555 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF26P17031 533 aaPredicted RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 SDHAP31040 664 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ACVR1BP36896 505 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 FXYD6P3P58550 94 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 UBE2NP61088 152 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ARF1P84077 181 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ATP6AP1Q15904 470 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 HIST3H3Q16695 136 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 NCMAPQ5T1S8 102 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 C9orf135Q5VTT2 229 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ZFP1Q6P2D0 407 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 CD300LDQ6UXZ3 194 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF813Q6ZN06 617 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 RASSF6Q6ZTQ3 369 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 FOXL2NBQ6ZUU3 175 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 FAM122BQ7Z309 247 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 IGFN1Q86VF2 1251 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 WDFY1Q8IWB7 410 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 C10orf67Q8IYJ2 551 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ARIH2OSQ8N7S6 290 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 AQP11Q8NBQ7 271 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 OR51A7Q8NH64 312 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 GIPC3Q8TF64 312 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 SLCO4A1Q96BD0 722 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 NMD3Q96D46 503 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 NRBF2Q96F24 287 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 PIK3IP1Q96FE7 263 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 TNFRSF13CQ96RJ3 184 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 GPA33Q99795 319 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 FOXB1Q99853 325 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 TMEM204Q9BSN7 226 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 MRPL13Q9BYD1 178 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 GABARAPL1Q9H0R8 117 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 OR52D1Q9H346 318 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 DENND2DQ9H6A0 471 aaPredicted RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 CRLF2Q9HC73 371 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 NRIP3Q9NQ35 241 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 TMEM38BQ9NVV0 291 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 NPAP1Q9NZP6 1156 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 CRNNQ9UBG3 495 aaPredicted RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF346Q9UL40 294 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 BAIAP2Q9UQB8 552 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 LRRK2Q5S007 2527 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 TEX13CA0A0J9YWL9 993 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 XKRYO14609 159 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ARPC3O15145 178 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 IDH3BO43837 385 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 E2F6O75461 281 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 UBL3O95164 117 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 FARS2O95363 451 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 CD3EP07766 207 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 QDPRP09417 244 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 VAMP1P23763 118 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 PTAFRP25105 342 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ACTR3P61158 418 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 ERVK-25P63136 954 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 RUNX1T1Q06455 604 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 CD47Q08722 323 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 RFX4Q33E94 735 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 MESTQ5EB52 335 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 THEM4Q5T1C6 240 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 FBXW10Q5XX13 1052 aa3.47□□□□□ -1.85
CNOT4-202ENST00000356162 SHQ1Q6PI26 577 aaKnown RBP3.47□□□□□ -1.85
CNOT4-202ENST00000356162 DNM1P34Q6PK57 102 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms