RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 A0A1B0GV50 99 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 A0A1W2PPH5 198 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 PRAF2O60831 178 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CPMP14384 443 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 EIF2S3P41091 472 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 PSMD4P55036 377 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 RPS27AP62979 156 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 UBA52P62987 128 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 TP53I3Q53FA7 332 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 MEPCEQ7L2J0 689 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 FCRLAQ7L513 359 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CDK20Q8IZL9 346 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CMTM4Q8IZR5 234 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 MUC20Q8N307 709 aaPredicted RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 DTD1Q8TEA8 209 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 THEM6Q8WUY1 208 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 SLC25A36Q96CQ1 311 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ZMYND19Q96E35 227 aaPredicted RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 C14orf144Q96I85 54 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 PARP12Q9H0J9 701 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 GAREM1Q9H706 876 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 IL21RQ9HBE5 538 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 NPDC1Q9NQX5 325 aaPredicted RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 GFOD1Q9NXC2 390 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 MSRAQ9UJ68 235 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 CT62P0C5K7 136 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 THBS2P35442 1172 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 MTNR1BP49286 362 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 FOXK2Q01167 660 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ACY1Q03154 408 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ECH1Q13011 328 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 OLFML2AQ68BL7 652 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 FIGLAQ6QHK4 219 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 OR2AK2Q8NG84 335 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 ST7LQ8TDW4 575 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 MRPL38Q96DV4 380 aaKnown RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 TNFRSF13CQ96RJ3 184 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 NKX3-1Q99801 234 aaPredicted RBP8.55□□□□□ -1.04
SMG6-202ENST00000354901 TCEAL7Q9BRU2 100 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 FN3KQ9H479 309 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 FKRPQ9H9S5 495 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 TRIM36Q9NQ86 728 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 DAPP1Q9UN19 280 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 RNF215Q9Y6U7 377 aa8.55□□□□□ -1.04
SMG6-202ENST00000354901 C2orf16Q68DN1 1984 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 OR2M5A3KFT3 312 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 SLC31A2O15432 143 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 FLRT2O43155 660 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 KLF4O43474 513 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 IGHA1P01876 353 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 ARG1P05089 322 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 ST6GAL1P15907 406 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 MUC1P15941 1255 aaPredicted RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 GRPRP30550 384 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 NDUFA6P56556 154 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 PPP1CAP62136 330 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 RPS15AP62244 130 aaKnown RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 TMEM196Q5HYL7 178 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 TMEM69Q5SWH9 247 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 DHRS7BQ6IAN0 325 aaPredicted RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 SDR9C7Q8NEX9 313 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 OR4K13Q8NH42 304 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 OR4C6Q8NH72 309 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 FCAMRQ8WWV6 532 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 TGM7Q96PF1 710 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 TEAD3Q99594 435 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 CHST6Q9GZX3 395 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 LAT2Q9GZY6 243 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 TOLLIPQ9H0E2 274 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 KRCC1Q9NPI7 259 aaPredicted RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 EXOGQ9Y2C4 368 aaKnown RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 MYO15AQ9UKN7 3530 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 A0A0B4J2A0 478 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 CDHR4A6H8M9 788 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 C5orf52A6NGY3 159 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 GPR89AB7ZAQ6 455 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 H0YGG7 62 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 GPR89BP0CG08 455 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 TYRP1P17643 537 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 RBM34P42696 430 aaKnown RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 ARF3P61204 181 aaPredicted RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 GPR18Q14330 331 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 TMEM44Q2T9K0 475 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 ARHGAP11BQ3KRB8 267 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 PRAMEF8Q5VWM4 474 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 PRAMEF7Q5VXH5 474 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 PAPD4Q6PIY7 484 aaKnown RBP8.54□□□□□ -1.04
SMG6-202ENST00000354901 OR6V1Q8N148 313 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 ZNF619Q8N2I2 560 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 OR4N2Q8NGD1 307 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 MYADMQ96S97 322 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 ZNF559Q9BR84 538 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 NDC1Q9BTX1 674 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 MED31Q9Y3C7 131 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 MPDZO75970 2070 aa8.54□□□□□ -1.04
SMG6-202ENST00000354901 RIIAD1A6NNX1 92 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms