RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CCDC71Q8IV32 467 aaPredicted RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 MMAAQ8IVH4 418 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 FUNDC1Q8IVP5 155 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 SNX31Q8N9S9 440 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 OR10G7Q8NGN6 311 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 SUN5Q8TC36 379 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 CXorf40AQ8TE69 158 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NAT14Q8WUY8 206 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 DNAJC9Q8WXX5 260 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 OSTF1Q92882 214 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NABP1Q96AH0 204 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ASB9Q96DX5 294 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NUS1Q96E22 293 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NAF1Q96HR8 494 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 TXN2Q99757 166 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 WRAP53Q9BUR4 548 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 RAB11FIP5Q9BXF6 653 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 RIBC2Q9H4K1 309 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ELOVL6Q9H5J4 265 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 MED20Q9H944 212 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 PRSS16Q9NQE7 514 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 AIG1Q9NVV5 245 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 GPR83Q9NYM4 423 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ATP6V1HQ9UI12 483 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF225Q9UK10 706 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 FZR1Q9UM11 496 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 FKBP7Q9Y680 259 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NUP210Q8TEM1 1887 aaPredicted RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF106Q9H2Y7 1883 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ALPK3Q96L96 1907 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 C15orf38-AP3S2A0A0A6YYH1 394 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 SLC5A10A0PJK1 596 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 MANBAO00462 879 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 LSM1O15116 133 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ZG16O60844 167 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 MTX2O75431 263 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 PSIP1O75475 530 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 RPSAP08865 295 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 PRPS2P11908 318 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 CD1EP15812 388 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ATP6V1C1P21283 382 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 GDI1P31150 447 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 OPRD1P41143 372 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 PRLHRP49683 370 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 DIO3P55073 304 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 CYCSP99999 105 aaKnown RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 SRYQ05066 204 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ANKRD55Q3KP44 614 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 GGTA1PQ4G0N0 100 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ACSF3Q4G176 576 aaPredicted RBP3.32□□□□□ -1.88
SMCO3-201ENST00000316048 BCL7AQ4VC05 210 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 AP1ARQ63HQ0 302 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NCR3LG1Q68D85 454 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 C3P1Q6ZMU1 363 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 GDPGP1Q6ZNW5 385 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 LPCAT2Q7L5N7 544 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ARPINQ7Z6K5 226 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 DHDDSQ86SQ9 333 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 DHFR2Q86XF0 187 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 SUMF1Q8NBK3 374 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 CATSPER1Q8NEC5 780 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NUP37Q8NFH4 326 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 OR9I1Q8NGQ6 314 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 PYDC1Q8WXC3 89 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 LRRC58Q96CX6 371 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 FBXO17Q96EF6 278 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 ART5Q96L15 291 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 P2RY13Q9BPV8 354 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 C1orf50Q9BV19 199 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 DPY30Q9C005 99 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 TRIM15Q9C019 465 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 NT5DC2Q9H857 520 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 WDR76Q9H967 626 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 IL1RL2Q9HB29 575 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 LRTM1Q9HBL6 345 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 HEBP1Q9NRV9 189 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 C1orf109Q9NX04 203 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 PSMD13Q9UNM6 376 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 SLC22A14Q9Y267 594 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 RNF11Q9Y3C5 154 aa3.32□□□□□ -1.88
SMCO3-201ENST00000316048 KIAA0100Q14667 2235 aaKnown RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 MGAT4DA6NG13 374 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 IGLON5A6NGN9 336 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 MPTX1A8MV57 137 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 PRSS44E7EML9 344 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 K7EQG2 157 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 EEDO75530 441 aaKnown RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 POP7O75817 140 aaKnown RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 MYO1DO94832 1006 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 SORBS2O94875 1100 aaKnown RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 IL6P05231 212 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 GSTT2P0CG29 244 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 GSTT2BP0CG30 244 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 THRBP10828 461 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 HSD17B1P14061 328 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 XRCC1P18887 633 aaPredicted RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 TCN1P20061 433 aaPredicted RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF10P21506 573 aaPredicted RBP3.31□□□□□ -1.88
SMCO3-201ENST00000316048 UCP1P25874 307 aa3.31□□□□□ -1.88
SMCO3-201ENST00000316048 P2RY2P41231 377 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms