RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 LAG3P18627 525 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 SP3Q02447 781 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 AVPI1Q5T686 147 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TMEM200AQ86VY9 491 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-201ENST00000300527 ARMC10Q8N2F6 343 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 GPR148Q8TDV2 347 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 GAL3ST3Q96A11 431 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 COX14Q96I36 57 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 CNTNAP3BQ96NU0 1288 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 C19orf53Q9UNZ5 99 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-201ENST00000300527 ETV7Q9Y603 341 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 PMS2P2O95744 297 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF77Q15935 545 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 KLHL26Q53HC5 615 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ATPAF1Q5TC12 328 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 LHX8Q68G74 356 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 PSRC1Q6PGN9 363 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 KCNRGQ8N5I3 272 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 CMTM3Q96MX0 182 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 TRIM2Q9C040 744 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 SRMSQ9H3Y6 488 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 PHPT1Q9NRX4 125 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 COA4Q9NYJ1 87 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 PRR13Q9NZ81 148 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 GLCEO94923 617 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 CSTAP01040 98 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 CASRP41180 1078 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 GRK6P43250 576 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 SPOCK1Q08629 439 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ANKRD33Q7Z3H0 272 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 OR1M1Q8NGA1 313 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 OR2G2Q8NGZ5 317 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 BARX1Q9HBU1 254 aaPredicted RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 WNT11O96014 354 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 CEBPBP17676 345 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 LSSP48449 732 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 SGCGQ13326 291 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 SMCO1Q147U7 214 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 OR52W1Q6IF63 320 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ANKRD16Q6P6B7 361 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 DHCR7Q9UBM7 475 aaKnown RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 SERGEFQ9UGK8 458 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 MSRAQ9UJ68 235 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ICAM5Q9UMF0 924 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 DAPP1Q9UN19 280 aa13.32□□□□□ -0.28
COL6A2-201ENST00000300527 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF208O43345 1280 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 MOSPD3O75425 235 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SNAPC5O75971 98 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 RFC3P40938 356 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 IL13RA1P78552 427 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 TDGQ13569 410 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 GLYATL3Q5SZD4 288 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SLC39A5Q6ZMH5 540 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 DGAT2L6Q6ZPD8 337 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 CMBLQ96DG6 245 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 AMELYQ99218 206 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SLC19A3Q9BZV2 496 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 PARP12Q9H0J9 701 aaKnown RBP13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SERTAD3Q9UJW9 196 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 TNFSF18Q9UNG2 199 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 A0A0A6YYC8 382 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-201ENST00000300527 RNF222A6NCQ9 220 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 I3L1I5 382 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-201ENST00000300527 BRINP1O60477 761 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SRPX2O60687 465 aaPredicted RBP13.31□□□□□ -0.28
COL6A2-201ENST00000300527 EML2O95834 649 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 CISD3P0C7P0 127 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 TAS2R19P59542 299 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 FHL1Q13642 323 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SLC22A6Q4U2R8 563 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 NKAPLQ5M9Q1 402 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 ADAMTSL4Q6UY14 1074 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 ACOT7LQ6ZUV0 252 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF417Q8TAU3 575 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 NUBPLQ8TB37 319 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 PHYHIPQ92561 330 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 ARL11Q969Q4 196 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 SYT4Q9H2B2 425 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 KCNG2Q9UJ96 466 aa13.31□□□□□ -0.28
COL6A2-201ENST00000300527 OR5K4A6NMS3 321 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 HRKO00198 91 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 EIF4E2O60573 245 aaKnown RBP13.3□□□□□ -0.28
COL6A2-201ENST00000300527 CTSVO60911 334 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ST6GAL1P15907 406 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 PTGFRP43088 359 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
COL6A2-201ENST00000300527 ENPP2Q13822 863 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms