RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SULT1B1O43704 296 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 SUSD5O60279 629 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 NSA2O95478 260 aaKnown RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 RENP00797 406 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 SLC37A1P57057 533 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 MFSD13AQ14CX5 517 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 LINC00052Q96N35 136 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 SLC19A3Q9BZV2 496 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 GPN1Q9HCN4 374 aaPredicted RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 CGGBP1Q9UFW8 167 aaPredicted RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 CDV3Q9UKY7 258 aaKnown RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 OR2M5A3KFT3 312 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 OR5K4A6NMS3 321 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 XRCC3O43542 346 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 FNTBP49356 437 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 ISXQ2M1V0 245 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 RBPMSQ93062 196 aaKnown RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 EVA1AQ9H8M9 152 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 SLC16A7O60669 478 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 MFGE8Q08431 387 aaPredicted RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 B3GNTL1Q67FW5 361 aaPredicted RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 TMEM151BQ8IW70 566 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 LCORQ96JN0 433 aaPredicted RBP22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 C4orf45Q96LM5 186 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 DMRTA2Q96SC8 542 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 TPSD1Q9BZJ3 242 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 ARL6Q9H0F7 186 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 ATG5Q9H1Y0 275 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 WBP1LQ9NX94 342 aa22.04■■□□□ 1.12
SPTSSA-201ENST00000298130 B8ZZF3 427 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 H7C417 338 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF254O75437 659 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 GIPP09681 153 aaPredicted RBP22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 LIPCP11150 499 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 EFNA3P52797 238 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 ARHGAP40Q5TG30 622 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 C11orf88Q6PI97 169 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 KCTD20Q7Z5Y7 419 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 OR11A1Q9GZK7 315 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 MTFP1Q9UDX5 166 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 FREM3P0C091 2139 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 CSN2P05814 226 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 CSRP1P21291 193 aaKnown RBP22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 MAP2K6P52564 334 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 EEF1A1P5Q5VTE0 462 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 SPICQ8N5J4 248 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 TNFAIP8L1Q8WVP5 186 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 MS4A7Q9GZW8 240 aaPredicted RBP22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 S1PR5Q9H228 398 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 PRODH2Q9UF12 536 aa22.03■■□□□ 1.12
SPTSSA-201ENST00000298130 LRP4O75096 1905 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 TRBV5-7A0A0A0MS05 114 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 M0QYG6 137 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 CXCR1P25024 350 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 NR0B1P51843 470 aaKnown RBP22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 C4orf46Q504U0 113 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 NHLRC3Q5JS37 347 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF627Q7L945 461 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 TMED4Q7Z7H5 227 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 METTL21AQ8WXB1 218 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 SLC38A3Q99624 504 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 FBXL3Q9UKT7 428 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 TCRBV16S1A1N1A0A5B0 115 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 DCDC2BA2VCK2 349 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 C2orf72A6NCS6 295 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 SRPX2O60687 465 aaPredicted RBP22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 SDC3O75056 442 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 BIKQ13323 160 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 HLXQ14774 488 aaPredicted RBP22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 SLC36A1Q7Z2H8 476 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 SDR16C5Q8N3Y7 309 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 ZNF417Q8TAU3 575 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 DUSP19Q8WTR2 217 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 FAM3DQ96BQ1 224 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 RADILQ96JH8 1075 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 DCBLD2Q96PD2 775 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 EMC3Q9P0I2 261 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 B9D1Q9UPM9 204 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 ETV7Q9Y603 341 aa22.02■■□□□ 1.12
SPTSSA-201ENST00000298130 TMEM272A0A1B0GTI8 110 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 XKRYO14609 159 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 CDC40O60508 579 aaKnown RBP eCLIP22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 IFI6P09912 130 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 CPN1P15169 458 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 RBMS2Q15434 407 aaKnown RBP22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 ACKR1Q16570 336 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 SHISA6Q6ZSJ9 500 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 OR51A2Q8NGJ7 313 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 ZNF275Q9NSD4 429 aaPredicted RBP22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 OPN4Q9UHM6 478 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 OR6A2O95222 327 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 HSD17B7P56937 341 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 RAP2BP61225 183 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 VWA2Q5GFL6 755 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 C16orf47Q6ZP98 133 aaPredicted RBP22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 NDUFAF7Q7L592 441 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 EID2Q8N6I1 236 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 OTOSQ8NHW6 89 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 EXO5Q9H790 373 aa22.01■■□□□ 1.11
SPTSSA-201ENST00000298130 SDHAF2Q9NX18 166 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms