RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 INSL4Q14641 139 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 GLYR1Q49A26 553 aaPredicted RBP14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 FAHD1Q6P587 224 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 OVCH1Q7RTY7 1134 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 CCNL2Q96S94 520 aaPredicted RBP14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 SRRQ9GZT4 340 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 HAO2Q9NYQ3 351 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 LRIT1Q9P2V4 623 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 NRAPQ86VF7 1730 aa14.09□□□□□ -0.15
SHROOM4-201ENST00000289292 ZNF728P0DKX0 622 aa14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 ACTBL2Q562R1 376 aa14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 AFMIDQ63HM1 303 aa14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 TMEM182Q6ZP80 229 aaPredicted RBP14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 FAM26EQ8N5C1 309 aa14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 MRPL43Q8N983 215 aaKnown RBP14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 C8orf33Q9H7E9 229 aaPredicted RBP14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 SLC22A7Q9Y694 548 aa14.08□□□□□ -0.15
SHROOM4-201ENST00000289292 VSTM5A8MXK1 200 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 KLK8O60259 260 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 CBX7O95931 251 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 F10P00742 488 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF74Q16587 644 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 SOHLH1Q5JUK2 328 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 RTN4RL1Q86UN2 441 aaPredicted RBP14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 SLC22A24Q8N4F4 322 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 C10orf90Q96M02 699 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 CSF3RQ99062 836 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 HSFX1Q9UBD0 423 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 SCML1Q9UN30 329 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 PCDHGA5Q9Y5G8 931 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 KIAA1551Q9HCM1 1747 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 RAB27BO00194 218 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 GIPP09681 153 aaPredicted RBP14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 UBE2IP63279 158 aaKnown RBP14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 LINC01465Q8N7H1 131 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 OR5L1Q8NGL2 311 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 FAM234AQ9H0X4 552 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 CDK5RAP2Q96SN8 1893 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 HTRA3P83110 453 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF595Q8IYB9 648 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 SGK3Q96BR1 496 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF385DQ9H6B1 395 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 NUMA1Q14980 2115 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 GLI4P10075 376 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 SLC6A12P48065 614 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 EVX1P49640 407 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 RPS15P62841 145 aaKnown RBP14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 BAXQ07812 192 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 DHRS4L2Q6PKH6 230 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF620Q6ZNG0 422 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 ANGPTL5Q86XS5 388 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 PSMF1Q92530 271 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 LMAN1LQ9HAT1 526 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 GAB2Q9UQC2 676 aa14.08□□□□□ -0.16
SHROOM4-201ENST00000289292 GFYI3L273 518 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 FOXK1P85037 733 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 NAA40Q86UY6 237 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 ZFP92A6NM28 416 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 TK1P04183 234 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 FOLR3P41439 243 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 P2RX3P56373 397 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 ARSJQ5FYB0 599 aaPredicted RBP14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 ADAMTSL4Q6UY14 1074 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 PLPP5Q8NEB5 264 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 NANOS1Q8WY41 292 aaKnown RBP14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 MS4A6EQ96DS6 147 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 A0A087WZY1 265 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 SOD1P00441 154 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 TGM1P22735 817 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 OR2B8PP59922 312 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 AGERQ15109 404 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 PLGLAQ15195 96 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 CORO6Q6QEF8 472 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 ENKD1Q9H0I2 346 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 NARFLQ9H6Q4 476 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 TMEFF2Q9UIK5 374 aaPredicted RBP14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 HCRTR1O43613 425 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 FCMRO60667 390 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 SNRPNP63162 240 aaKnown RBP14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 RNLSQ5VYX0 342 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 ANKRD19PQ9H560 264 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 EVPLQ92817 2033 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 H7C1Q1 480 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 DUSP3P51452 185 aaPredicted RBP14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 LIPNQ5VXI9 398 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 CYHR1Q6ZMK1 362 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 TSSK2Q96PF2 358 aa14.07□□□□□ -0.16
SHROOM4-201ENST00000289292 LOC102725191A0A1B0GVB3 256 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 PPP1R2P9O14990 202 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 OR6M1Q8NGM8 313 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 UCN3Q969E3 161 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 NKX3-1Q99801 234 aaPredicted RBP14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 PIGMQ9H3S5 423 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 A6NCN8 305 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 DCTN6O00399 190 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF217O75362 1048 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 PTBP1P26599 531 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 RPL34P49207 117 aaKnown RBP14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 RTL6Q6ICC9 239 aa14.06□□□□□ -0.16
SHROOM4-201ENST00000289292 OR9K2Q8NGE7 335 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms