RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 HIST2H3PS2Q5TEC6 136 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SLC48A1Q6P1K1 146 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 OGFOD3Q6PK18 319 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 IL34Q6ZMJ4 242 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 CBLL1Q75N03 491 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 CARFQ8N187 725 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 KIAA1958Q8N8K9 716 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 C3orf58Q8NDZ4 430 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SEMA6DQ8NFY4 1073 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 ABHD4Q8TB40 342 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 GNPNAT1Q96EK6 184 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 MRGPRX4Q96LA9 322 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 PECRQ9BY49 303 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 GALNT9Q9HCQ5 603 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SEMA4GQ9NTN9 838 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SLAMF8Q9P0V8 285 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 TCHHQ07283 1943 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 RPS10-NUDT3A0A1W2PQS6 291 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SEC14L6B5MCN3 397 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 F11P03951 625 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 HOXD11P31277 338 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 HTR2BP41595 481 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 HOXA4Q00056 320 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SSBP1Q04837 148 aaKnown RBP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SMAGPQ0VAQ4 97 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 TRA2AQ13595 282 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 IAH1Q2TAA2 248 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 VMA21Q3ZAQ7 101 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF439Q8NDP4 499 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 OR9Q2Q8NGE9 314 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 OR2T6Q8NHC8 308 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 MS4A8Q9BY19 250 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 NFS1Q9Y697 457 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SLCO1B1Q9Y6L6 691 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 A3GALT2U3KPV4 340 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 LILRA5A6NI73 299 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 CLDN24A6NM45 220 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 FAM166BA8MTA8 275 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 ARPC3O15145 178 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 PMS2P2O95744 297 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 ADRA2CP18825 462 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 DEFB103AP81534 67 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 C9orf135Q5VTT2 229 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 MFSD12Q6NUT3 480 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 ABHD17CQ6PCB6 329 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 DBX2Q6ZNG2 339 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 OVCH1Q7RTY7 1134 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 COMMD7Q86VX2 200 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 WFDC8Q8IUA0 241 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 PIANPQ8IYJ0 282 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 OR13C2Q8NGS9 318 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 GIMAP1Q8WWP7 306 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 WBP2Q969T9 261 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 DNAJA3Q96EY1 480 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 EDEM2Q9BV94 578 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 GON7Q9BXV9 100 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 SLA2Q9H6Q3 261 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 DDX31Q9H8H2 851 aaKnown RBP3.75□□□□□ -1.81
SCN3A-201ENST00000283254 LHX3Q9UBR4 397 aa3.75□□□□□ -1.81
SCN3A-201ENST00000283254 DNAJC25-GNG10A0A024R161 153 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 LOC100289279A0A1B0GTE1 492 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MYADML2A6NDP7 307 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 H0YIG0 161 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ST8SIA3O43173 380 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 HOXD13P35453 343 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GPR3P46089 330 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GNB2P62879 340 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CLPPQ16740 277 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF718Q3SXZ3 478 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TRAT1Q6PIZ9 186 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TMEM200AQ86VY9 491 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR2L13Q8N349 312 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR52N1Q8NH53 320 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 APOBEC3DQ96AK3 386 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SPACA9Q96E40 222 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TRMT61AQ96FX7 289 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 C19orf43Q9BQ61 176 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 NMES1Q9C002 83 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ADAM19Q9H013 955 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PCDHGA5Q9Y5G8 931 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 BAZ2AQ9UIF9 1905 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TRGV10A0A0A0MS01 117 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TRGV8A0A0C4DH27 118 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 A0A1B0GWA3 101 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SMLR1H3BR10 107 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 RAD1O60671 282 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR8G3PP0DMU2 310 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 NID1P14543 1247 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 AADACP22760 399 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 C21orf33P30042 268 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 BCL6P41182 706 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MTNR1BP49286 362 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 EDDM3AQ14507 147 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TAF9Q16594 264 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PHYHD1Q5SRE7 291 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PIP5KL1Q5T9C9 394 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PRAMEF5Q5TYX0 476 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OTUD1Q5VV17 481 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PRAMEF6Q5VXH4 476 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms