RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 IGKV3-11P04433 115 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 CFPP27918 469 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 POU3F4P49335 361 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 SLC17A1Q14916 467 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 MEP1BQ16820 701 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 OTPQ5XKR4 325 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 OR5M10Q6IEU7 315 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 FAM160A2Q8N612 972 aaPredicted RBP13.77□□□□□ -0.21
DDX56-201ENST00000258772 ATOH1Q92858 354 aaPredicted RBP13.77□□□□□ -0.21
DDX56-201ENST00000258772 TSLPQ969D9 159 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 TGM7Q96PF1 710 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 GINS4Q9BRT9 223 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 PDE7BQ9NP56 450 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 B9D1Q9UPM9 204 aa13.77□□□□□ -0.21
DDX56-201ENST00000258772 C17orf51A8MQB3 221 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 TMEM150CB9EJG8 249 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 MCRIP1C9JLW8 97 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 XKRYO14609 159 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 SNAPC5O75971 98 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 HLA-DQA2P01906 255 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 ITGA5P08648 1049 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 CSF1P09603 554 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 KCNAB1Q14722 419 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 NHLRC1Q6VVB1 395 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 BIVMQ86UB2 503 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 ZNF721Q8TF20 911 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 TSEN15Q8WW01 171 aaKnown RBP13.76□□□□□ -0.21
DDX56-201ENST00000258772 OR8B4Q96RC9 309 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 GAL3ST4Q96RP7 486 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 KCNN3Q9UGI6 736 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 NUP50Q9UKX7 468 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 CEP290O15078 2479 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 TRAV36DV7A0A075B6V5 113 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 CDC14CA4D256 554 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 SHISA7A6NL88 538 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 B8ZZF3 427 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 DDAH2O95865 285 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 CCKBRP32239 447 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 OR1D4P47884 311 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 DLX5P56178 289 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 C2orf76Q3KRA6 126 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 NHLRC3Q5JS37 347 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 YOD1Q5VVQ6 348 aaPredicted RBP13.76□□□□□ -0.21
DDX56-201ENST00000258772 C3P1Q6ZMU1 363 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 TTLL10Q6ZVT0 673 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 SLC35D2Q76EJ3 337 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 MARCH3Q86UD3 253 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 OR4D10Q8NGI6 311 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 METTL21AQ8WXB1 218 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 THRSPQ92748 146 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 CCDC120Q96HB5 630 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 OR1F2PQ96R84 312 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 NRSN2Q9GZP1 204 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 UCK1Q9HA47 277 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 CDV3Q9UKY7 258 aaKnown RBP13.76□□□□□ -0.21
DDX56-201ENST00000258772 MMACHCQ9Y4U1 282 aa13.76□□□□□ -0.21
DDX56-201ENST00000258772 TRAV18A0A075B6X5 111 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 UBE2QL1A1L167 161 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 TUBAL3A6NHL2 446 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 LILRA5A6NI73 299 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 FBXO45P0C2W1 286 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 NKAIN2Q5VXU1 208 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 FAM198BQ6UWH4 519 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 ZNF679Q8IYX0 411 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 FAM3DQ96BQ1 224 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 SLC25A36Q96CQ1 311 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.75□□□□□ -0.21
DDX56-201ENST00000258772 SLC22A13Q9Y226 551 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 FREM3P0C091 2139 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 PRSS37A4D1T9 235 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 TLCD2A6NGC4 264 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 SLC17A2O00624 439 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 SCO1O75880 301 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 KDM4BO94953 1096 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 WISP1O95388 367 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 PNPP00491 289 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 PLGP00747 810 aaPredicted RBP13.75□□□□□ -0.21
DDX56-201ENST00000258772 RLN1P04808 185 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 CSF2RBP32927 897 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 CENPAP49450 140 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 ELOCQ15369 112 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 ACKR1Q16570 336 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 TEX30Q5JUR7 227 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 MAMDC2Q7Z304 686 aaPredicted RBP13.75□□□□□ -0.21
DDX56-201ENST00000258772 BPHLQ86WA6 291 aaPredicted RBP13.75□□□□□ -0.21
DDX56-201ENST00000258772 OR6N1Q8NGY5 312 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 RNF128Q8TEB7 428 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.75□□□□□ -0.21
DDX56-201ENST00000258772 ASB17Q8WXJ9 295 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 PPP1R14AQ96A00 147 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 NUDT9Q9BW91 350 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 KCNK15Q9H427 330 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 CUTCQ9NTM9 273 aa13.75□□□□□ -0.21
DDX56-201ENST00000258772 KIF26BQ2KJY2 2108 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 IGKV3D-11A0A0A0MRZ8 115 aa13.74□□□□□ -0.21
DDX56-201ENST00000258772 OR6C65A6NJZ3 312 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms