RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SMAD9O15198 467 aaKnown RBP14.05□□□□□ -0.16
DDX55-201ENST00000238146 SIGLEC6O43699 453 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 GPANK1O95872 356 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 TIMP1P01033 207 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 PSMD4P55036 377 aaKnown RBP14.05□□□□□ -0.16
DDX55-201ENST00000238146 TAS2R19P59542 299 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 RAB11BQ15907 218 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 HYAL4Q2M3T9 481 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 ITPRIPL2Q3MIP1 535 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 WDR38Q5JTN6 314 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 GLT8D1Q68CQ7 371 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 ENPP7Q6UWV6 458 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 RNF44Q7L0R7 432 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 GALNT16Q8N428 558 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 TMEM185AQ8NFB2 350 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 OR5M8Q8NGP6 311 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 TSEN15Q8WW01 171 aaKnown RBP14.05□□□□□ -0.16
DDX55-201ENST00000238146 RSC1A1Q92681 617 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 EDAQ92838 391 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 NARS2Q96I59 477 aaKnown RBP14.05□□□□□ -0.16
DDX55-201ENST00000238146 CAPNS2Q96L46 248 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 DCBLD2Q96PD2 775 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 POTEKPQ9BYX7 375 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 FBXO4Q9UKT5 387 aa14.05□□□□□ -0.16
DDX55-201ENST00000238146 ELOA3DA6NLF2 546 aaPredicted RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 RDH16O75452 317 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 CCKBRP32239 447 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 EGR3Q06889 387 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 RASGEF1BQ0VAM2 473 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 ELOA3BQ3SY89 546 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 MESTQ5EB52 335 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 BEX5Q5H9J7 111 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 ASPHD2Q6ICH7 369 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 LRRC69Q6ZNQ3 347 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 OR2W3Q7Z3T1 314 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 ELOA3Q8NG57 546 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 OR1J2Q8NGS2 313 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 ZNF296Q8WUU4 475 aaPredicted RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 SLC25A21Q9BQT8 299 aaPredicted RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 ATG2BQ96BY7 2078 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 CDH23Q9H251 3354 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 PLRG1O43660 514 aaKnown RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 OR2F2O95006 317 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 RAB38P57729 211 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 OR2F1Q13607 317 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 GPR18Q14330 331 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 ZNF345Q14585 488 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 ATPAF1Q5TC12 328 aaPredicted RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 C1orf53Q5VUE5 145 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 FAM166AQ6J272 317 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 TMEM205Q6UW68 189 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 BOLLQ8N9W6 283 aaKnown RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 TMEM229BQ8NBD8 167 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 TSACCQ96A04 125 aaPredicted RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 LMF1Q96S06 567 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 VRK1Q99986 396 aaPredicted RBP14.04□□□□□ -0.16
DDX55-201ENST00000238146 SLC6A17Q9H1V8 727 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 SLC17A5Q9NRA2 495 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 PCOLCE2Q9UKZ9 415 aa14.04□□□□□ -0.16
DDX55-201ENST00000238146 TBC1D3DA0A087WVF3 549 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 RNF222A6NCQ9 220 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TBC1D3LB9A6J9 549 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 BCL2L11O43521 198 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 ALOX12BO75342 701 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TXNDC12O95881 172 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 AMY2AP04746 511 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TBC1D3HP0C7X1 549 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 CT45A8P0DMV1 189 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 CT45A9P0DMV2 189 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 SRSF4Q08170 494 aaKnown RBP14.03□□□□□ -0.16
DDX55-201ENST00000238146 DHRS2Q13268 280 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 CT45A2Q5DJT8 189 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TBC1D3CQ6IPX1 549 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 C11orf87Q6NUJ2 197 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TBC1D3Q8IZP1 549 aaPredicted RBP14.03□□□□□ -0.16
DDX55-201ENST00000238146 CSNK1A1LQ8N752 337 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 BAHD1Q8TBE0 780 aaPredicted RBP14.03□□□□□ -0.16
DDX55-201ENST00000238146 LIPHQ8WWY8 451 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 LPAR4Q99677 370 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 G6PC3Q9BUM1 346 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 ZNF471Q9BX82 626 aaPredicted RBP14.03□□□□□ -0.16
DDX55-201ENST00000238146 Q9N2J8 555 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 MYOZ1Q9NP98 299 aaPredicted RBP14.03□□□□□ -0.16
DDX55-201ENST00000238146 MMP25Q9NPA2 562 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 GRHPRQ9UBQ7 328 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 CYB5R1Q9UHQ9 305 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TGFBR3LH3BV60 316 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 HCRTR1O43613 425 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 RAD1O60671 282 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 ATG12O94817 140 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 H2AFB1P0C5Y9 115 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 SLC25A4P12235 298 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 CCL5P13501 91 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 PPIAP62937 165 aaKnown RBP14.03□□□□□ -0.16
DDX55-201ENST00000238146 RUNX3Q13761 415 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 TAF13Q15543 124 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 STK11Q15831 433 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 LRRC37A5PQ49AS3 106 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 OTPQ5XKR4 325 aa14.03□□□□□ -0.16
DDX55-201ENST00000238146 GATSQ8NAP1 163 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms