RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 NRIP3Q9NQ35 241 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PCNX2A6NKB5 2137 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PHRF1Q9P1Y6 1649 aaKnown RBP13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 RNASEK-C17orf49H0YIS7 233 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 J3KTA2 159 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PSMB1P20618 241 aaKnown RBP13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ETFDHQ16134 617 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 TMEM88Q6PEY1 159 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 C17orf107Q6ZR85 190 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ACVR1CQ8NER5 493 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 BOD1Q96IK1 185 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ELAVL4P26378 380 aaKnown RBP13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 OXA1LQ15070 435 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 HES7Q9BYE0 225 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 FZD8Q9H461 694 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 NAGKQ9UJ70 344 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PMCHP20382 165 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 TPPP2P59282 170 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 OR2T6Q8NHC8 308 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PLSCR3Q9NRY6 295 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 LOC100289279A0A1B0GTE1 492 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 SRMP19623 302 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 IL4RP24394 825 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PDZD3Q86UT5 571 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC38A6Q8IZM9 456 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 SLC22A24Q8N4F4 322 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ACTR3CQ9C0K3 210 aaPredicted RBP13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 GPR37O15354 613 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 HAPLN1P10915 354 aaPredicted RBP13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 NAGAP17050 411 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 KHSRPQ92945 711 aaKnown RBP eCLIP13.53□□□□□ -0.245e-8■■■■■ 27.9
SPTLC2-201ENST00000216484 CLEC5AQ9NY25 188 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 VAPAQ9P0L0 249 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ABCC6O95255 1503 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 BPIFB3P59826 476 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF534Q76KX8 674 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 ETV7Q9Y603 341 aa13.53□□□□□ -0.24
SPTLC2-201ENST00000216484 OR8G1Q15617 311 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 RPL22L1Q6P5R6 122 aaKnown RBP13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF687Q8N1G0 1237 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 FUBP1Q96AE4 644 aaKnown RBP13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 ZNF300Q96RE9 604 aaPredicted RBP13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 H7C1C5 153 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 GPR32O75388 356 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 NQO2P16083 231 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 CD1BP29016 333 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 CCKARP32238 428 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 GPR12P47775 334 aa13.52□□□□□ -0.24
SPTLC2-201ENST00000216484 SOD2P04179 222 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 MS4A2Q01362 244 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 PRAMEF20Q5VT98 475 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 OR2A1Q8NGT9 310 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 TMEM106AQ96A25 262 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 TMEM231Q9H6L2 316 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 WDR76Q9H967 626 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 DNAJC15Q9Y5T4 150 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 ZCWPW2A0A1B0GU75 182 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 APEX1P27695 318 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 OPRD1P41143 372 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 SIAH3Q8IW03 269 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 PLA2G12AQ9BZM1 189 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 EGLN1Q9GZT9 426 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A0A6YYC8 382 aaPredicted RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 I3L1I5 382 aaPredicted RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 SPCS2Q15005 226 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 PGGHGQ32M88 737 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 LCN15Q6UWW0 184 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 APCDD1Q8J025 514 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 L3HYPDHQ96EM0 354 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 THOC3Q96J01 351 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 FYTTD1Q96QD9 318 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 CADP27708 2225 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 OR5K3A6NET4 321 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 BAK1Q16611 211 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 NTPCRQ9BSD7 190 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 LANCL2Q9NS86 450 aa13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 CNOT2Q9NZN8 540 aaKnown RBP13.52□□□□□ -0.25
SPTLC2-201ENST00000216484 JTBO76095 146 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ACSM4P0C7M7 580 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 REEP5Q00765 189 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ZNF528Q3MIS6 628 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 WDR74Q6RFH5 385 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 OR5AS1Q8N127 324 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 BTNL2Q9UIR0 455 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 MYO7BQ6PIF6 2116 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 A0A0G2JLL6 359 aaPredicted RBP13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 IQCJQ1A5X6 159 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
SPTLC2-201ENST00000216484 OR2G6Q5TZ20 316 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms