RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 A0A0B4J203 849 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 A0A1W2PNU3 283 aaPredicted RBP13.6□□□□□ -0.23
TRIM3-215ENST00000639856 ACOD1A6NK06 481 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 MASP2O00187 686 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 RPP14O95059 124 aaKnown RBP13.6□□□□□ -0.23
TRIM3-215ENST00000639856 AKR7A3O95154 331 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 CYC1P08574 325 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 COX6A1P12074 109 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 ALKBH1Q13686 389 aaKnown RBP13.6□□□□□ -0.23
TRIM3-215ENST00000639856 EFR3AQ14156 821 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 COL28A1Q2UY09 1125 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 PM20D2Q8IYS1 436 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 SUMF1Q8NBK3 374 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 OR2Y1Q8NGV0 311 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 OR6N2Q8NGY6 317 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 MAP6Q96JE9 813 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 KLHL15Q96M94 604 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 DERL3Q96Q80 235 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 TMEM9BQ9NQ34 198 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 TMEM14AQ9Y6G1 99 aa13.6□□□□□ -0.23
TRIM3-215ENST00000639856 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 PCNX2A6NKB5 2137 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 A8MV72 311 aaPredicted RBP13.59□□□□□ -0.23
TRIM3-215ENST00000639856 XKRYO14609 159 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 PDCD5O14737 125 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 UBL3O95164 117 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 ALOX5APP20292 161 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 AHCYP23526 432 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 SLC6A1P30531 599 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
TRIM3-215ENST00000639856 GPR176Q14439 515 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 ZFP69Q49AA0 526 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 C1orf140Q5VVS0 124 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 ASB18Q6ZVZ8 466 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 DPY19L4Q7Z388 723 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 MISPQ8IVT2 679 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 ELP5Q8TE02 316 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 NPAS1Q99742 590 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 DEFB126Q9BYW3 111 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 STRADBQ9C0K7 418 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 DDX28Q9NUL7 540 aaKnown RBP13.59□□□□□ -0.23
TRIM3-215ENST00000639856 FRRS1LQ9P0K9 344 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 CLEC4AQ9UMR7 237 aa13.59□□□□□ -0.23
TRIM3-215ENST00000639856 EEF1E1O43324 174 aaKnown RBP13.58□□□□□ -0.23
TRIM3-215ENST00000639856 TRIM3O75382 744 aaPredicted RBP13.58□□□□□ -0.23
TRIM3-215ENST00000639856 SLC43A1O75387 559 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 DXOO77932 396 aaKnown RBP13.58□□□□□ -0.23
TRIM3-215ENST00000639856 MMP15P51511 669 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 RPL27P61353 136 aaKnown RBP13.58□□□□□ -0.23
TRIM3-215ENST00000639856 PITPNAQ00169 270 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 EGR3Q06889 387 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 C1QTNF12Q5T7M4 302 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 TIPARPQ7Z3E1 657 aaKnown RBP13.58□□□□□ -0.23
TRIM3-215ENST00000639856 OR10G3Q8NGC4 313 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 OR5AK2Q8NH90 309 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 STK35Q8TDR2 534 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 ORAI1Q96D31 301 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 SNX18Q96RF0 628 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 TSPAN10Q9H1Z9 355 aaPredicted RBP13.58□□□□□ -0.23
TRIM3-215ENST00000639856 ABCG5Q9H222 651 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 FKBP7Q9Y680 259 aa13.58□□□□□ -0.23
TRIM3-215ENST00000639856 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ORC5O43913 435 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 TMEM127O75204 238 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ITGA10O75578 1167 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 PLGP00747 810 aaPredicted RBP13.58□□□□□ -0.24
TRIM3-215ENST00000639856 FOLR3P41439 243 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ACKR1Q16570 336 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 Q499Y3 187 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF671Q8TAW3 534 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ZNF519Q8TB69 540 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 LGALS14Q8TCE9 139 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 TMEM234Q8WY98 164 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 CREB3L1Q96BA8 519 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 IMMP1LQ96LU5 166 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 RASL10BQ96S79 203 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 GFI1Q99684 422 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 OR2B2Q9GZK3 357 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ANKRD10Q9NXR5 420 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ITGB1BP2Q9UKP3 347 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 IKZF2Q9UKS7 526 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 FREM2Q5SZK8 3169 aa13.58□□□□□ -0.24
TRIM3-215ENST00000639856 PRSS37A4D1T9 235 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 IFITM5A6NNB3 132 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 CENPXA8MT69 81 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 AIPO00170 330 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 PHYHO14832 338 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 OR2T1O43869 369 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 AHSA1O95433 338 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 GPANK1O95872 356 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 JMJD7P0C870 316 aa13.57□□□□□ -0.24
TRIM3-215ENST00000639856 RPS27P42677 84 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms