RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 MTCL1Q9Y4B5 1905 aaKnown RBP2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 IGLV11-55A0A075B6I3 123 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 IGKV2D-24A0A075B6R9 120 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 IGKV1D-13A0A0B4J2D9 117 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 A0A1W2PPV9 198 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 HIDE1A8MVS5 230 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ERVV-1B6SEH8 477 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 F6UB75 175 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 DLGAP1O14490 977 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 FABP3P05413 133 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 UQCRFS1P1P0C7P4 283 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ZDHHC11BP0C7U3 371 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 IGKV1-13P0DP09 117 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 KITLGP21583 273 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 CRYBB2P43320 205 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 CDKN1BP46527 198 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 CYB561P49447 251 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 CRISP3P54108 245 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ACTA2P62736 377 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 RPS21P63220 83 aaKnown RBP2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ACTG2P63267 376 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ACTC1P68032 377 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ENPEPQ07075 957 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 TMEM107Q6UX40 140 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 LINC00173Q6ZV60 143 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 ASCL5Q7RTU5 278 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 FAM228AQ86W67 206 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 SLC22A9Q8IVM8 553 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 RHEBL1Q8TAI7 183 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 CD300LFQ8TDQ1 290 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 STARD8Q92502 1023 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 TUBGCP3Q96CW5 907 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 TPD52L3Q96J77 140 aa2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 RPF2Q9H7B2 306 aaKnown RBP2.8□□□□□ -1.96
GPCPD1-207ENST00000633552 SNAI2O43623 268 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 WBP4O75554 376 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 MED6O75586 246 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 PALMO75781 387 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 EIF3GO75821 320 aaKnown RBP eCLIP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 MAGP20916 626 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 SERPINB5P36952 375 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 MNAT1P51948 309 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 NUTF2P61970 127 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 SLC7A9P82251 487 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 MRPS22P82650 360 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 TCP10Q12799 353 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 ZSCAN26Q16670 478 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 VPS26BQ4G0F5 336 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 PCP2Q8IVA1 136 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 OR2L3Q8NG85 312 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 PLPPR1Q8TBJ4 325 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 GIMAP1Q8WWP7 306 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 TMEM54Q969K7 222 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 EXOSC8Q96B26 276 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 FAM3DQ96BQ1 224 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 FOPNLQ96NB1 174 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 TSSK3Q96PN8 268 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 P2RX4Q99571 388 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 TPK1Q9H3S4 243 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 KCNJ16Q9NPI9 418 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 SAMSN1Q9NSI8 373 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 RBAKQ9NYW8 714 aaPredicted RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 CD84Q9UIB8 345 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 TBX21Q9UL17 535 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 STARD10Q9Y365 291 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 F11RQ9Y624 299 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 NACAE9PAV3 2078 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 ZNFX1Q9P2E3 1918 aaKnown RBP2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 NOTCH2Q04721 2471 aa2.79□□□□□ -1.96
GPCPD1-207ENST00000633552 A0A0U1RQS6 177 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 A0A1W2PPE3 182 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 HEATR9A2RTY3 570 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 SMCO2A6NFE2 343 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 ZNF726A6NNF4 738 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 LSM1O15116 133 aaKnown RBP2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 ANGPTL7O43827 346 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 CLIC3O95833 236 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 SMIM10L1P0DMW3 83 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 ZNF136P52737 540 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 PFN3P60673 137 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 EBI3Q14213 229 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 CLINT1Q14677 625 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 RABL6Q3YEC7 729 aaPredicted RBP2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 HES5Q5TA89 166 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 ANKRD26P1Q6NSI1 321 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 ZNF836Q6ZNA1 936 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 ZNF493Q6ZR52 646 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 SLC25A48Q6ZT89 311 aaKnown RBP2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 NCCRP1Q6ZVX7 275 aaPredicted RBP2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 STRADAQ7RTN6 431 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 NIPA1Q7RTP0 329 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 PDIK1LQ8N165 341 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 CYB561D1Q8N8Q1 229 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 B3GNT7Q8NFL0 401 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 SLC7A13Q8TCU3 470 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 SLC2A14Q8TDB8 520 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 PIBF1Q8WXW3 757 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 CCDC126Q96EE4 140 aa2.78□□□□□ -1.96
GPCPD1-207ENST00000633552 SMIM10Q96HG1 83 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms