RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 H3BMH7 237 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 CDC40O60508 579 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00540-203ENST00000631321 EIF4E2O60573 245 aaKnown RBP11.55□□□□□ -0.56
LINC00540-203ENST00000631321 ALDOBP05062 364 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 NME1P15531 152 aaKnown RBP11.55□□□□□ -0.56
LINC00540-203ENST00000631321 PLA2G7Q13093 441 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 TOR2AQ5JU69 321 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 SIGIRRQ6IA17 410 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 GKN2Q86XP6 184 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 PM20D2Q8IYS1 436 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 FTMTQ8N4E7 242 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 ASB17Q8WXJ9 295 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 TGM7Q96PF1 710 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 AMELYQ99218 206 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 TMPRSS13Q9BYE2 586 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 OR8D2Q9GZM6 311 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 GPN1Q9HCN4 374 aaPredicted RBP11.55□□□□□ -0.56
LINC00540-203ENST00000631321 MGAT4CQ9UBM8 478 aa11.55□□□□□ -0.56
LINC00540-203ENST00000631321 PLSCR5A0PG75 271 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 TO15178 435 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CREBL2O60519 120 aaPredicted RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 MAS1P04201 325 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 LBX1P52954 281 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 RAP2BP61225 183 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 WDR38Q5JTN6 314 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 OR51A4Q8NGJ6 313 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 ZNF519Q8TB69 540 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 PIGKQ92643 395 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 TSLPQ969D9 159 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CLIP3Q96DZ5 547 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 OR8B4Q96RC9 309 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 PTDSS2Q9BVG9 487 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 RAB33BQ9H082 229 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CUTCQ9NTM9 273 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 KCNG2Q9UJ96 466 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 SPTBP11277 2137 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 GGT3PA6NGU5 568 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 TUBAL3A6NHL2 446 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 ALG1L2C9J202 215 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 H0YC42 278 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 TSPAN2O60636 221 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 MT-ATP6P00846 226 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 ANXA7P20073 488 aaKnown RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CXCR1P25024 350 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 FAUP35544 74 aaKnown RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CENPAP49450 140 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 TSPAN5P62079 268 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 SLC17A1Q14916 467 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 ELAVL1Q15717 326 aaKnown RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 GRK1Q15835 563 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CSRP2Q16527 193 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 FAAP20Q6NZ36 180 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 Q6ZS52 159 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 MAMDC2Q7Z304 686 aaPredicted RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 SMRP1Q8NCR6 262 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 ELF4Q99607 663 aaPredicted RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 SLC17A5Q9NRA2 495 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 CA10Q9NS85 328 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 TAS2R8Q9NYW2 309 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 VSX1Q9NZR4 365 aaPredicted RBP11.54□□□□□ -0.56
LINC00540-203ENST00000631321 B9D1Q9UPM9 204 aa11.54□□□□□ -0.56
LINC00540-203ENST00000631321 A8MUA0 341 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 HCRTR2O43614 444 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 NPIPB7O75200 414 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 CTAG2O75638 210 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 RBBP9O75884 186 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 TOXO94900 526 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 GPANK1O95872 356 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 CFDP00746 253 aaPredicted RBP11.53□□□□□ -0.56
LINC00540-203ENST00000631321 C4BPBP20851 252 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 RPS27P42677 84 aaKnown RBP11.53□□□□□ -0.56
LINC00540-203ENST00000631321 ROM1Q03395 351 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 EBPQ15125 230 aaKnown RBP11.53□□□□□ -0.56
LINC00540-203ENST00000631321 POU4F3Q15319 338 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 TOMM20Q15388 145 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 TOMM34Q15785 309 aaPredicted RBP11.53□□□□□ -0.56
LINC00540-203ENST00000631321 SGCBQ16585 318 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 TEX30Q5JUR7 227 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 FAM166AQ6J272 317 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 RFPL4BQ6ZWI9 263 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 SLC36A1Q7Z2H8 476 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 PRR22Q8IZ63 422 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 CEP76Q8TAP6 659 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 LMX1AQ8TE12 382 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 RNF128Q8TEB7 428 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 MVB12AQ96EY5 273 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 NUDT9Q9BW91 350 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 CHRDQ9H2X0 955 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 ELOVL3Q9HB03 270 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 MAB21L2Q9Y586 359 aa11.53□□□□□ -0.56
LINC00540-203ENST00000631321 A0A1W2PR77 199 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 CIB4A0PJX0 185 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 PRSS37A4D1T9 235 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 M0R233 179 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 XKRYO14609 159 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 CSF1P09603 554 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 M6PRP20645 277 aa11.52□□□□□ -0.56
LINC00540-203ENST00000631321 MAOBP27338 520 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms