RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 SNX33Q8WV41 574 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 CCL17Q92583 94 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 GTF3AQ92664 365 aaKnown RBP10.09□□□□□ -0.79
CHD2-218ENST00000629346 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 SLC30A2Q9BRI3 323 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 PAIP1Q9H074 479 aaKnown RBP10.09□□□□□ -0.79
CHD2-218ENST00000629346 RAD21L1Q9H4I0 556 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 PIF1Q9H611 641 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 MARCH7Q9H992 704 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 CCDC167Q9P0B6 97 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 ASH2LQ9UBL3 628 aa10.09□□□□□ -0.79
CHD2-218ENST00000629346 PPIAL4EA0A075B759 164 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 PPIAL4CA0A0B4J2A2 164 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 CDHR4A6H8M9 788 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 CFAP73A6NFT4 308 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 PPIAL4DF5H284 164 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 CLIC1O00299 241 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 TRAF3IP2O43734 574 aaPredicted RBP10.08□□□□□ -0.8
CHD2-218ENST00000629346 TFPTP0C1Z6 253 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 PPIAL4FP0DN26 164 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 HOXB9P17482 250 aaPredicted RBP10.08□□□□□ -0.8
CHD2-218ENST00000629346 PTDSS1P48651 473 aaKnown RBP10.08□□□□□ -0.8
CHD2-218ENST00000629346 EPS8Q12929 822 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 FADDQ13158 208 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 MMEL1Q495T6 779 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 RNF220Q5VTB9 566 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 C11orf87Q6NUJ2 197 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 FUNDC1Q8IVP5 155 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 ZNF440Q8IYI8 595 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 PARP8Q8N3A8 854 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 SLC38A5Q8WUX1 472 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 SPDL1Q96EA4 605 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 TMEM19Q96HH6 336 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 MAGEB18Q96M61 343 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 OR51B6Q9H340 312 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 RLIMQ9NVW2 624 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 B3GNT2Q9NY97 397 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 GPR160Q9UJ42 338 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 PRDM4Q9UKN5 801 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 INSIG2Q9Y5U4 225 aa10.08□□□□□ -0.8
CHD2-218ENST00000629346 A0A096LPI6 279 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 A0A0G2JPF8 293 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 HNRNPCL2B2RXH8 293 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 HNRNPCL3B7ZW38 293 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 RPL36A-HNRNPH2H7BZ11 118 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 HNRNPCL1O60812 293 aaKnown RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 NDUFA7O95182 113 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 CSF1P09603 554 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 FAM157BP0CG42 384 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 HNRNPCL4P0DMR1 293 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 ZNF12P17014 697 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 ZNF14P17017 642 aaPredicted RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 MAKP20794 623 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 P2RY4P51582 365 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 MAP2K6P52564 334 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 SELENOVP59797 346 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 BNIP2Q12982 314 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 HNRNPA0Q13151 305 aaKnown RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 LARS2Q15031 903 aaKnown RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 RGNQ15493 299 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 DEFB112Q30KQ8 113 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 LRIF1Q5T3J3 769 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 KPRPQ5T749 579 aaPredicted RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 RGS7BPQ6MZT1 257 aaPredicted RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 ZNF836Q6ZNA1 936 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 VRK2Q86Y07 508 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 CCDC36Q8IYA8 594 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 BHLHE22Q8NFJ8 381 aaPredicted RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 OR52P1PQ8NH57 321 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 STON2Q8WXE9 905 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 TAPBPLQ9BX59 468 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 CHIAQ9BZP6 476 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 SAP30LQ9HAJ7 183 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 CACYBPQ9HB71 228 aaKnown RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 A4GALTQ9NPC4 353 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 ZNF232Q9UNY5 417 aa10.07□□□□□ -0.8
CHD2-218ENST00000629346 ZNF443Q9Y2A4 671 aaPredicted RBP10.07□□□□□ -0.8
CHD2-218ENST00000629346 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 SRRM5B3KS81 715 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 SLC43A1O75387 559 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 SASH3O75995 380 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 VAMP5O95183 116 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 IGHMP01871 453 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 SBK2P0C263 348 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 BMP2P12643 396 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 CXCR1P25024 350 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 LSP1P33241 339 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 ACAA2P42765 397 aaKnown RBP10.06□□□□□ -0.8
CHD2-218ENST00000629346 GIPRP48546 466 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 KLF3P57682 345 aaPredicted RBP10.06□□□□□ -0.8
CHD2-218ENST00000629346 SEC61A1P61619 476 aaKnown RBP10.06□□□□□ -0.8
CHD2-218ENST00000629346 GLO1Q04760 184 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 PDCD1Q15116 288 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 AGKQ53H12 422 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 RPS26P11Q5JNZ5 115 aaPredicted RBP10.06□□□□□ -0.8
CHD2-218ENST00000629346 C9orf139Q6ZV77 190 aa10.06□□□□□ -0.8
CHD2-218ENST00000629346 MSRB3Q8IXL7 192 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms