RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 C9orf106Q8NAJ2 232 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 MCFD2Q8NI22 146 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 PAQR8Q8TEZ7 354 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 UCN3Q969E3 161 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 PIK3IP1Q96FE7 263 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ART5Q96L15 291 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 AMDHD1Q96NU7 426 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 WFDC6Q9BQY6 131 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 WWTR1Q9GZV5 400 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 AMBNQ9NP70 447 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 IMPAD1Q9NX62 359 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 TAS2R16Q9NYV7 291 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 RHCGQ9UBD6 479 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SLC13A4Q9UKG4 626 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 A4GNTQ9UNA3 340 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 MGAT4BQ9UQ53 548 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 IFT52Q9Y366 437 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SNX8Q9Y5X2 465 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 CHCHD2Q9Y6H1 151 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 MBD3L4A6NDZ8 208 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 MBD3L3A6NE82 208 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM247A6NEH6 219 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 AGAP5A6NIR3 686 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 CD1AP06126 327 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 BMP7P18075 431 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 BTF3P20290 206 aaKnown RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 RFX3P48380 749 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ARFIP1P53367 373 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 CRISP3P54108 245 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 PRKCDQ05655 676 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 FAM27E3Q08E93 113 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 HSPB3Q12988 150 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SSX1Q16384 188 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF791Q3KP31 576 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ARMCX4Q5H9R4 360 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 OR4C11Q6IEV9 310 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 CHMP1BQ7LBR1 199 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF550Q7Z398 422 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 P4HA3Q7Z4N8 544 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 PRIMA1Q86XR5 153 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SNX29P2Q8IUI4 249 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SLC44A2Q8IWA5 706 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 LRRC25Q8N386 305 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 STX19Q8N4C7 294 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 KBTBD8Q8NFY9 601 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SFXN5Q8TD22 340 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SMPDL3BQ92485 455 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 OR5M11Q96RB7 305 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ROGDIQ9GZN7 287 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 OR51E2Q9H255 320 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 GLIPR2Q9H4G4 154 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ARMC7Q9H6L4 198 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 BCL2L10Q9HD36 194 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 MAN2C1Q9NTJ4 1040 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF629Q9UEG4 869 aaPredicted RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 NDRG3Q9UGV2 375 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 MKLN1Q9UL63 735 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 PPIEQ9UNP9 301 aaKnown RBP4.32□□□□□ -1.72
LINC00550-201ENST00000629293 UGT2A1Q9Y4X1 527 aa4.32□□□□□ -1.72
LINC00550-201ENST00000629293 A0A1W2PRQ8 180 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ISPDA4D126 451 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 AHRRA9YTQ3 701 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 C5orf58C9J3I9 102 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 UPK1BO75841 260 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 H1F0P07305 194 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NR2F6P10588 404 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 POU2F1P14859 743 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OPRM1P35372 400 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CCT3P49368 545 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CLK1P49759 484 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 UGT2B15P54855 530 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CRYZQ08257 329 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SLC25A30Q5SVS4 291 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 MEDAGQ5VYS4 303 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 RBM45Q8IUH3 476 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PM20D2Q8IYS1 436 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OR1J4Q8NGS1 313 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 RASSF5Q8WWW0 418 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 RAB8BQ92930 207 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 EXOSC8Q96B26 276 aaKnown RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SLC35G5Q96KT7 338 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 OPALINQ96PE5 141 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CCL19Q99731 98 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 PLEKHF2Q9H8W4 249 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 GPR35Q9HC97 309 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CLN6Q9NWW5 311 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ING3Q9NXR8 418 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 VSX1Q9NZR4 365 aaPredicted RBP4.31□□□□□ -1.72
LINC00550-201ENST00000629293 CNIH4Q9P003 139 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 P2RX2Q9UBL9 471 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 GPR160Q9UJ42 338 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 ASB4Q9Y574 426 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 NCKAP5O14513 1909 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 FREM1Q5H8C1 2179 aa4.31□□□□□ -1.72
LINC00550-201ENST00000629293 SEC14L5O43304 696 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms