RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SRSF5Q13243 272 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 ZNF74Q16587 644 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 FAM74A1Q5RGS3 127 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 OR4C3Q8NH37 302 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 BAHD1Q8TBE0 780 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 TSACCQ96A04 125 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 NPAS1Q99742 590 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 ZNF230Q9UIE0 474 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 TGFBR3LH3BV60 316 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 SRPX2O60687 465 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 MELTFP08582 738 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 APEHP13798 732 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 TANGO2Q6ICL3 276 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 RNF44Q7L0R7 432 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 ZNF546Q86UE3 836 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 GABRG1Q8N1C3 465 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 CSNK1A1LQ8N752 337 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 CLRN3Q8NCR9 226 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 OR6N2Q8NGY6 317 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 GPX8Q8TED1 209 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 LRRC46Q96FV0 321 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 DNTTIP1Q9H147 329 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 CDV3Q9UKY7 258 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 TBC1D3DA0A087WVF3 549 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 FAM74A7A6NL05 159 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 TBC1D3LB9A6J9 549 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 PMS2P2O95744 297 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 OR4E1P0C645 316 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 TBC1D3HP0C7X1 549 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 PSMD4P55036 377 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 SSBP1Q04837 148 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 C2orf76Q3KRA6 126 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 ITPRIPL2Q3MIP1 535 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 FAM74A3Q4VXF1 159 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 ALG10Q5BKT4 473 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 TBC1D3CQ6IPX1 549 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 TBC1D3Q8IZP1 549 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 C12orf45Q8N5I9 185 aaPredicted RBP17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 WDR13Q9H1Z4 485 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 SLC6A15Q9H2J7 730 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 WDR76Q9H967 626 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 MPTX1A8MV57 137 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 CDC40O60508 579 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 RASGRP1O95267 797 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 PLATP00750 562 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 F13BP05160 661 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 FBXO45P0C2W1 286 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 ALOX5APP20292 161 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 MESTQ5EB52 335 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 MOB3CQ70IA8 216 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 DPY19L4Q7Z388 723 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 C10orf53Q8N6V4 93 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 LIPHQ8WWY8 451 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 FAM3DQ96BQ1 224 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 C4orf45Q96LM5 186 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 PCDHB16Q9NRJ7 776 aa17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 MRTO4Q9UKD2 239 aaKnown RBP17.74■□□□□ 0.43
PDLIM3-212ENST00000620787 DNAH14Q0VDD8 3507 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 A0A1B0GW55 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 ELOA3DA6NLF2 546 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 H0Y8X5 98 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 TXNDC12O95881 172 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 CD8AP01732 235 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4L2P0CJ85 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4L3P0CJ86 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4L4P0CJ87 422 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4L5P0CJ88 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4L6P0CJ89 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4L7P0CJ90 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 RAB3AP20336 220 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 EGR3Q06889 387 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 RASGEF1BQ0VAM2 473 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 RAB11BQ15907 218 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DEFB115Q30KQ5 88 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 ELOA3BQ3SY89 546 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 ELOA3Q8NG57 546 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 CCDC107Q8WV48 283 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 FAM131CQ96AQ9 280 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 AMELYQ99218 206 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 G6PC3Q9BUM1 346 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DUX4Q9UBX2 424 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 A0A0D9SG52 128 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 LOC100289279A0A1B0GTE1 492 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 TMEM82A0PJX8 343 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 SLC17A2O00624 439 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 HCRTR1O43613 425 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 CT45A8P0DMV1 189 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 CT45A9P0DMV2 189 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 CT45A2Q5DJT8 189 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 WDR38Q5JTN6 314 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 MANEAQ5SRI9 462 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 JMJD6Q6NYC1 403 aaPredicted RBP17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 BCORP1Q8N888 145 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 STEAP2Q8NFT2 490 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 DCBLD2Q96PD2 775 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 Q9N2J8 555 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 PLCL2Q9UPR0 1127 aa17.73■□□□□ 0.43
PDLIM3-212ENST00000620787 A0A1B0GTI1 187 aa17.72■□□□□ 0.43
PDLIM3-212ENST00000620787 ABCD4O14678 606 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms