RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SPAG7O75391 227 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 GPX5O75715 221 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 CLPXO76031 633 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 SYNGR4O95473 234 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 NTN1O95631 604 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 DANCRP0C864 163 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 PTNP21246 168 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 IL12AP29459 219 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 SLC1A3P43003 542 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 RPL14P50914 215 aaKnown RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 MAP2K6P52564 334 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 HTD2P86397 168 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 DBPQ10586 325 aaPredicted RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 BNIP2Q12982 314 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 LASP1Q14847 261 aaKnown RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 ZNF141Q15928 474 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 RPS26P11Q5JNZ5 115 aaPredicted RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 DCST2Q5T1A1 773 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 C6orf52Q5T4I8 152 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 DDI2Q5TDH0 399 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 SLC25A24Q6NUK1 477 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 ZNF544Q6NX49 715 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 TPRA1Q86W33 373 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 CADM2Q8N3J6 435 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 OR7A2PQ8NGA2 310 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 OR10D3Q8NH80 312 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 OR2W6PQ8NHA6 318 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 OR2V1Q8NHB1 315 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 RP9Q8TA86 221 aaKnown RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 ROBO4Q8WZ75 1007 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 S100PBPQ96BU1 408 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 C12orf43Q96C57 262 aaKnown RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 SGTBQ96EQ0 304 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 C16orf58Q96GQ5 468 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 RNF170Q96K19 258 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 C3orf30Q96M34 536 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 KLHL15Q96M94 604 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 RHNO1Q9BSD3 238 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 MECRQ9BV79 373 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 METTL9Q9H1A3 318 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 CXorf36Q9H7Y0 433 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 BRD7Q9NPI1 651 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
GPC6-202ENST00000617456 GRHPRQ9UBQ7 328 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 ICAM5Q9UMF0 924 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 GPR52Q9Y2T5 361 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 FIS1Q9Y3D6 152 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 PCNX3Q9H6A9 2034 aa7.57□□□□□ -1.2
GPC6-202ENST00000617456 FAM234BA2RU67 622 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ITGB1BP1O14713 200 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ZNF264O43296 627 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 TMEM127O75204 238 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 STX11O75558 287 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 GNAO1P09471 354 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 G6PDP11413 515 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 PSMB1P20618 241 aaKnown RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 POU1F1P28069 291 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ARRB2P32121 409 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 GPX4P36969 197 aaPredicted RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 RFX3P48380 749 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 CAPZA1P52907 286 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 TMBIM6P55061 237 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 CASP9P55211 416 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 RAC3P60763 192 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ABCE1P61221 599 aaKnown RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 HBA1P69905 142 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 CBFBQ13951 182 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 P2RY6Q15077 328 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 SSX2Q16385 188 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ARHGAP11BQ3KRB8 267 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 SPDYE7PQ495Y7 208 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ZNF672Q499Z4 452 aaPredicted RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 NCMAPQ5T1S8 102 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 AGAP6Q5VW22 663 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 HBMQ6B0K9 141 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ADAM5Q6NVV9 412 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 FIGNL1Q6PIW4 674 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 PTCHD4Q6ZW05 846 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 SZRD1Q7Z422 152 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 C6orf120Q7Z4R8 191 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ATG4DQ86TL0 474 aaPredicted RBP7.56□□□□□ -1.2
GPC6-202ENST00000617456 GID4Q8IVV7 300 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 STEAP2Q8NFT2 490 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 KBTBD8Q8NFY9 601 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 TSPAN14Q8NG11 270 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 OR5W2Q8NH69 310 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 OR6X1Q8NH79 312 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 PHOSPHO1Q8TCT1 267 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 GPR119Q8TDV5 335 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ST7LQ8TDW4 575 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 RNF128Q8TEB7 428 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 TMEM234Q8WY98 164 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ST8SIA1Q92185 356 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 OSTF1Q92882 214 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 CDS1Q92903 461 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 ZNF566Q969W8 418 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 RNF145Q96MT1 663 aa7.56□□□□□ -1.2
GPC6-202ENST00000617456 SDF2Q99470 211 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms