RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CYSLTR2Q9NS75 346 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR52A1Q9UKL2 312 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 FCF1Q9Y324 198 aaKnown RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 SNX11Q9Y5W9 270 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 RGPD2P0DJD1 1756 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 ZFP92A6NM28 416 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 C9J4A7 227 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SLC16A7O60669 478 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 COX5AP20674 150 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 ABCD3P28288 659 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 PDZD11Q5EBL8 140 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 Q6ZN92 141 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 CCDC116Q8IYX3 515 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 NAGSQ8N159 534 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SEH1LQ96EE3 360 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OPALINQ96PE5 141 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 FAAP24Q9BTP7 215 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 GPR61Q9BZJ8 451 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DMRT3Q9NQL9 472 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 HEMK1Q9Y5R4 338 aaPredicted RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 SORBS2O94875 1100 aaKnown RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 EPHA1P21709 976 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DDTP30046 118 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DOC2BQ14184 412 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 GPR18Q14330 331 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 PABPC1L2AQ5JQF8 200 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 C11orf87Q6NUJ2 197 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TBPL2Q6SJ96 375 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 CATSPERDQ86XM0 798 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR51A2Q8NGJ7 313 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR13C9Q8NGT0 318 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR4F5Q8NH21 305 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR4F4Q96R69 305 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 RASL12Q9NYN1 266 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 A0A1W2PPQ1 181 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TYRP1P17643 537 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DGKEP52429 567 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 EMC4Q5J8M3 183 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 NSUN5P2Q63ZY6 315 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TMEM107Q6UX40 140 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SUSD3Q96L08 255 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 INIPQ9NRY2 104 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 MMP24Q9Y5R2 645 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 PTGDR2Q9Y5Y4 395 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR5K3A6NET4 321 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 ESAMQ96AP7 390 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TIMM29Q9BSF4 260 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 METTL7AQ9H8H3 244 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 LAG3P18627 525 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 Q6ZTK2 550 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SDR9C7Q8NEX9 313 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 FIBINQ8TAL6 211 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SGPP1Q9BX95 441 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 NOSIPQ9Y314 301 aaKnown RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 MED12Q93074 2177 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 ARRDC1Q8N5I2 433 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ZMYND19Q96E35 227 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 TRAPPC1Q9Y5R8 145 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PLRG1O43660 514 aaKnown RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 ADH5P11766 374 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ARRB2P32121 409 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 POU3F4P49335 361 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 SYT14P1Q58G82 188 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 OR52W1Q6IF63 320 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 C22orf39Q6P5X5 142 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 FJX1Q86VR8 437 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 OR51S1Q8NGJ8 323 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 RAB18Q9NP72 206 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CHEK1O14757 476 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CTXN1P60606 82 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 HIST3H3Q16695 136 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CTSL3PQ5NE16 218 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 LEMD1Q68G75 181 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 STUMQ69YW2 141 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 AKR1E2Q96JD6 320 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 SLC25A19Q9HC21 320 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 NENFQ9UMX5 172 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 TOPAZ1Q8N9V7 1692 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 SLC38A8A6NNN8 435 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ABCD4O14678 606 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PMCHP20382 165 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 KIR2DL3P43628 341 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 ARRB1P49407 418 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 ERVS71-1P61550 626 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PMS2P11Q13670 270 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 HLXQ14774 488 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 ZNF551Q7Z340 670 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 DTWD2Q8NBA8 298 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 HHIPL1Q96JK4 782 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 NPAS1Q99742 590 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 CORINQ9Y5Q5 1042 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 AKR7A2O43488 359 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 XRCC3O43542 346 aa8.12□□□□□ -1.11
TTC28-208ENST00000612946 PPP1R11O60927 126 aaPredicted RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 TARBP2Q15633 366 aaKnown RBP8.12□□□□□ -1.11
TTC28-208ENST00000612946 SMN1Q16637 294 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms