RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 THBDP07204 575 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 NOS3P29474 1203 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 ZNF84P51523 738 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 NR1H2P55055 460 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 FXYD6P3P58550 94 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 CD47Q08722 323 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 TBRG1Q3YBR2 411 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 BEX5Q5H9J7 111 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 LRFN4Q6PJG9 635 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 CD300LDQ6UXZ3 194 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 THSD4Q6ZMP0 1018 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 C22orf34Q6ZV56 151 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 FAM122BQ7Z309 247 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 ADCK1Q86TW2 530 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 HIPK1Q86Z02 1210 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 WDFY1Q8IWB7 410 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 ATG16L2Q8NAA4 619 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 OR52N5Q8NH56 324 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 OR5K1Q8NHB7 308 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 PYDC1Q8WXC3 89 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 HDAC2Q92769 488 aaKnown RBP12.51□□□□□ -0.41
CTSA-219ENST00000607841 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
CTSA-219ENST00000607841 SAMD8Q96LT4 415 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 Q96M85 177 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 FOXB1Q99853 325 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 IFT27Q9BW83 186 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 DENND2DQ9H6A0 471 aaPredicted RBP12.51□□□□□ -0.41
CTSA-219ENST00000607841 SMURF2Q9HAU4 748 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 NTN4Q9HB63 628 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 IL20Q9NYY1 176 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 ADAM18Q9Y3Q7 739 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 IER3IP1Q9Y5U9 82 aa12.51□□□□□ -0.41
CTSA-219ENST00000607841 A0A096LPE4 126 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 TEX13CA0A0J9YWL9 993 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 FAM221AA4D161 298 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 G3V2T6 193 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ARPC3O15145 178 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 MGRN1O60291 552 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 CTAG2O75638 210 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 PPP1R3DO95685 299 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 TXNDC12O95881 172 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 GUCA1AP43080 201 aaPredicted RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 ZNF133P52736 654 aaPredicted RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 KRR1Q13601 381 aaKnown RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 KLHL17Q6TDP4 642 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ZNF813Q6ZN06 617 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ZNF627Q7L945 461 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 TMEM179BQ7Z7N9 219 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 DNAJC9Q8WXX5 260 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 LRTOMTQ8WZ04 291 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ZNF837Q96EG3 531 aaPredicted RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 CENPNQ96H22 339 aaPredicted RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 ERMAPQ96PL5 475 aaPredicted RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 NIPSNAP1Q9BPW8 284 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ESRP2Q9H6T0 727 aaKnown RBP12.5□□□□□ -0.41
CTSA-219ENST00000607841 EGLN3Q9H6Z9 239 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 RASSF1Q9NS23 344 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 TBC1D23Q9NUY8 699 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 KIF17Q9P2E2 1029 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 SLC25A15Q9Y619 301 aa12.5□□□□□ -0.41
CTSA-219ENST00000607841 ARPC4-TTLL3A0A0A6YYG9 625 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 PRSS37A4D1T9 235 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
CTSA-219ENST00000607841 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 MESTQ5EB52 335 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 C10orf128Q5T292 105 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 SVOPLQ8N434 492 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 WDR31Q8NA23 367 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
CTSA-219ENST00000607841 PIK3IP1Q96FE7 263 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
CTSA-219ENST00000607841 BAIAP2Q9UQB8 552 aa12.49□□□□□ -0.41
CTSA-219ENST00000607841 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.48□□□□□ -0.41
CTSA-219ENST00000607841 A0A1W2PR80 420 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 SLC22A23A1A5C7 686 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 DEFB108AA8MXU0 73 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 H3BN98 237 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 SOCS2O14508 198 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 HRGP04196 525 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 OR8G3PP0DMU2 310 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 B4GALT1P15291 398 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 ZNF23P17027 643 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 NPR2P20594 1047 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 PRKACGP22612 351 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 CAPZA2P47755 286 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 TMEM108Q6UXF1 575 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 AMIGO2Q86SJ2 522 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 HS3ST5Q8IZT8 346 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 OR2T33Q8NG76 320 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 STMN2Q93045 179 aa12.48□□□□□ -0.41
CTSA-219ENST00000607841 RASD2Q96D21 266 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms