RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZNF540Q8NDQ6 660 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 IL17RDQ8NFM7 739 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 FOXN4Q96NZ1 517 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 MOGAT1Q96PD6 335 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 TMEM43Q9BTV4 400 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 MED29Q9NX70 200 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 NDE1Q9NXR1 346 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 MRPL39Q9NYK5 338 aaKnown RBP16.22■□□□□ 0.19
PNKP-213ENST00000599543 TAS2R1Q9NYW7 299 aa16.22■□□□□ 0.19
PNKP-213ENST00000599543 SLC35F4A4IF30 521 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 LMX1BO60663 402 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 SERPINI2O75830 405 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 AHCYP23526 432 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 SNTB2Q13425 540 aaKnown RBP16.21■□□□□ 0.19
PNKP-213ENST00000599543 IFI44LQ53G44 452 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 PHYHD1Q5SRE7 291 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 FAM166AQ6J272 317 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 CYP2R1Q6VVX0 501 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 NKAIN4Q8IVV8 208 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 SVOPLQ8N434 492 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 OR6N1Q8NGY5 312 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 TMEM158Q8WZ71 300 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 LZICQ8WZA0 190 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 LRR1Q96L50 414 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 CHODLQ9H9P2 273 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 NOX3Q9HBY0 568 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 DYNLRB1Q9NP97 96 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 RIMS3Q9UJD0 308 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 KCNS2Q9ULS6 477 aa16.21■□□□□ 0.19
PNKP-213ENST00000599543 LOC100289279A0A1B0GTE1 492 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 ZNF726A6NNF4 738 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 CHP2O43745 196 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 GMNNO75496 209 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 MT-ATP6P00846 226 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 HLA-HP01893 362 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 CD79AP11912 226 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 ATP6V1B2P21281 511 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 CAMK2DQ13557 499 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 DAG1Q14118 895 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 GSG1Q2KHT4 349 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 KRT80Q6KB66 452 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 ZNF813Q6ZN06 617 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 PXKQ7Z7A4 578 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 TMEM255BQ8WV15 326 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 TXNDC15Q96J42 360 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 PRSS27Q9BQR3 290 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 ULBP2Q9BZM5 246 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 BPESC1Q9GZL8 116 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 POFUT2Q9Y2G5 429 aa16.2■□□□□ 0.18
PNKP-213ENST00000599543 IGHV4-61A0A0C4DH41 118 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 SH3PXD2BA1X283 911 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 PLPP3O14495 311 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 PHF1O43189 567 aaPredicted RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 DIRAS1O95057 198 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 IFNW1P05000 195 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 ADORA3P0DMS8 318 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 DAOP14920 347 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 B4GALT1P15291 398 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 TSEN54Q7Z6J9 526 aaKnown RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 MEX3DQ86XN8 651 aaKnown RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 PHC2Q8IXK0 858 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 OR5J2Q8NH18 312 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 PFN4Q8NHR9 129 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 NEU4Q8WWR8 484 aaPredicted RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 GEMIN6Q8WXD5 167 aaKnown RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 CCDC124Q96CT7 223 aaKnown RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 MSI2Q96DH6 328 aaKnown RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 THTPAQ9BU02 230 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 DCAF13Q9NV06 445 aaKnown RBP16.19■□□□□ 0.18
PNKP-213ENST00000599543 MAGEL2Q9UJ55 1249 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 RPS6KA6Q9UK32 745 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 A4GNTQ9UNA3 340 aa16.19■□□□□ 0.18
PNKP-213ENST00000599543 C11orf98E9PRG8 122 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 PIP5K1CO60331 668 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 OR5F1O95221 314 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 OR6A2O95222 327 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 ZNF23P17027 643 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 IGFBP5P24593 272 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 CSNK1A1P48729 337 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 UGT2B15P54855 530 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 CBX1P83916 185 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 PIGFQ07326 219 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 TTC33Q6PID6 262 aaPredicted RBP16.18■□□□□ 0.18
PNKP-213ENST00000599543 LINC00114Q6XXX2 140 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 ZNF627Q7L945 461 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 ARIH2OSQ8N7S6 290 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 SLC7A6OSQ96CW6 309 aaPredicted RBP16.18■□□□□ 0.18
PNKP-213ENST00000599543 MS4A3Q96HJ5 214 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 NSMCE2Q96MF7 247 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 DOK1Q99704 481 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 FOXB1Q99853 325 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 B3GNT2Q9NY97 397 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 CMAHPQ9Y471 501 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 SPEF1Q9Y4P9 236 aa16.18■□□□□ 0.18
PNKP-213ENST00000599543 FFAR1O14842 300 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 RAB36O95755 333 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 CH25HO95992 272 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 SRD5A1P18405 259 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 HNF1AP20823 631 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 NR4A1P22736 598 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms